Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01897 ATGAGGTCCTTTCATGTCACAGTGACAGCTCTGTGCTGTGTAGTGGTTGCGGTTGGAGTGCTACCACTCTCCTTAGATGCACAACTTGACCCTTCCTTTTACAGAAACACTTGTCCAAAGGTTCATTCCATTGTTCGCGAAGTCGTCAGAACCGTCTCAAAGAAAGATCCCCGCATGCTTGCTAGTCTCGTTAGACTTCACTTTCATGACTGCTTTGTTCAAGGCTGTGACGCATCGATTTTGTTGAACAACACTGCGACGATAGTGAGTGAGCAACAAGCTTTGCCAAACAATAACTCGATAAGAGGTTTGGATGTTGTGAACGATATCAAGACAGCAGTGGAAAATGCTTGCCCCGGAGTGGTTTCTTGTGCTGATATTCTTGCCCTGGCAGCAGAAATTTCTTCTGTTCTGGCTGGTGGTCCTGATTGGAAAGTACCCCTTGGAAGAAGGGATAGTTTAACAGCAAACAGAACCCTTGCAAATGAAAATCTTCCAGCTCCATTCTTCAATCTCACTCGACTTAAAGCTGCTTTTGCTGTTCAAGGCCTTGACACTACTGATCTAGTTGCACTCTCAGGTGCTCATACAATTGGAAGATCTCATTGTGCTTTCTTTACTGATCGATTGTACAACTTCAGTGGTACAGGAAAACCCGATCCAACTCTTGACACAACTTACTTGCAACAATTGAAAAAAATATGCCCCAATGGTGGACCTAACAACCTTGCCAATTTTGACCCAACTACTCCTGATACATTGGACAAGAACTACTTCTCCAATCTTCAGGTTAAGAAGGGTTTGCTTCAGAGTGACCAAGAGCTATTTTCCACAACTGGTGCTGATACCATTAGCATTGTCAACAAGTTCAGCAGTGACCAAAAGGCTTTCTTTGACAGCTTTGAGGCTTCAATGATTAAAATGAGTAAAATTGATGTGCTCACTGGAAAGAAAGGAGAGATCAGAAAACATTGCAATTTTGTTAACAAGAAATCTGTTGAACTTGATATTGCTACTGTGGCCTCCCAAGATTCATCGGTGGAGGGTATGGTTAGCTCAATCTAA 1065 0.4291 MRSFHVTVTALCCVVVAVGVLPLSLDAQLDPSFYRNTCPKVHSIVREVVRTVSKKDPRMLASLVRLHFHDCFVQGCDASILLNNTATIVSEQQALPNNNSIRGLDVVNDIKTAVENACPGVVSCADILALAAEISSVLAGGPDWKVPLGRRDSLTANRTLANENLPAPFFNLTRLKAAFAVQGLDTTDLVALSGAHTIGRSHCAFFTDRLYNFSGTGKPDPTLDTTYLQQLKKICPNGGPNNLANFDPTTPDTLDKNYFSNLQVKKGLLQSDQELFSTTGADTISIVNKFSSDQKAFFDSFEASMIKMSKIDVLTGKKGEIRKHCNFVNKKSVELDIATVASQDSSVEGMVSSI 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01897 354 Gene3D - 33 329 - -
Cca08g01897 354 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca08g01897 354 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca08g01897 354 PRINTS Haem peroxidase superfamily signature 140 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca08g01897 354 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca08g01897 354 PRINTS Haem peroxidase superfamily signature 247 262 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca08g01897 354 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca08g01897 354 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca08g01897 354 PRINTS Plant peroxidase signature 102 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca08g01897 354 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca08g01897 354 PRINTS Plant peroxidase signature 140 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca08g01897 354 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca08g01897 354 PRINTS Plant peroxidase signature 245 260 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca08g01897 354 PRINTS Plant peroxidase signature 261 278 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca08g01897 354 PRINTS Plant peroxidase signature 303 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca08g01897 354 ProSitePatterns Peroxidases proximal heme-ligand signature. 188 198 IPR019793 -
Cca08g01897 354 PANTHER PEROXIDASE FAMILY PROTEIN 7 339 - -
Cca08g01897 354 PANTHER PEROXIDASE 72-RELATED 7 339 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca08g01897 354 ProSiteProfiles Plant heme peroxidase family profile. 28 329 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca08g01897 354 CDD secretory_peroxidase 28 328 IPR033905 GO:0004601|GO:0042744
Cca08g01897 354 Gene3D Peroxidase, domain 2 166 308 - -
Cca08g01897 354 SUPERFAMILY Heme-dependent peroxidases 28 329 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cca08g01897 354 Pfam Peroxidase 45 292 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01897 Cca-Chr8 51543494 51546692 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g01897 14 329 Peroxidase AT5G06720 56.782 4.72e-130 374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01897 K00430 - gmx:547499 617.461