Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01895 ATGAAATCCCTTGGTCTCTCTGCGACAGCTTTATGCAGTGTAGTGGTTGTGCTTGGAGCACTACCCTTGTTCTCATATGCACAGTTAGATCCTTCATTCTACAATAGCACATGTTCAGATGTTCATTCCATTGTACGTGAGGTGCTATCAAATGTTTCCCAATCTGATCCACGCATGCTTGCCAGTCTCATCAGGCTCCACTTTCACGACTGTTTTGTTCAAGGGTGTGATGCATCAATTCTGTTGAACGACACAGATACAATCGTGAGTGAACAAAGTGCTTTGCCAAATAACAACTCCATAAGAGGTTTGGATGTTGTCAACCAGATCAAGACACAGGTGGAAAATGCTTGTCCTGGCATAGTTTCTTGTGCTGATATTCTTGCTCTTGCAGCTGAAATATCTTCTGATCTGGCTAGTGGTCCAACTTGGGAAGTTCCATTGGGAAGAAGAGATAGCTTAACCGCAAATAAAACCCTTGCTGGTGAAAATCTTCCGGGTCCATCCTTTACCCTTGATCAACTTAAATCTGCATTTATTACTAATCAAAGCCTCAACATCACTGATCTGGTTGCACTTTCAGGTGCTCATACAATTGGTAGAGCTCAATGCAAATTTTTTGTTGATCGATTATATAATTTCAACAGTACTGGCAACCCAGATTCTACTCTTAACACAACTCTCTTACAATCATTGCAATTAATATGTCCCAATGGTGGACCTGGGACTAATCTCACTAATTTGGACCTAACCACTCCTGATACATTTGACTCCAACTATTACTCCAATCTTCAACTTCAAAATGGCTTGCTTCAAAGTGACCAAGAACTATTTAACTCGAGTGATGCAGATATCATTGCCTTAATCAACAATTTTAGTAGTAACCAAACTCTTTTCTTTGAAAACTTTAAGGCGTCAATGATAAAAATGGGCAACCTCGGAGTGCTAACAGGATCACAAGGAGAAATTCGAACACAGTGTAATTCTGTGAATGGAAATTCTTCTGGACTTGCTACTCAAGCCACCAAAGAATCATCACAGGATGGCATGGTTAGCTCAATATAA 1065 0.4028 MKSLGLSATALCSVVVVLGALPLFSYAQLDPSFYNSTCSDVHSIVREVLSNVSQSDPRMLASLIRLHFHDCFVQGCDASILLNDTDTIVSEQSALPNNNSIRGLDVVNQIKTQVENACPGIVSCADILALAAEISSDLASGPTWEVPLGRRDSLTANKTLAGENLPGPSFTLDQLKSAFITNQSLNITDLVALSGAHTIGRAQCKFFVDRLYNFNSTGNPDSTLNTTLLQSLQLICPNGGPGTNLTNLDLTTPDTFDSNYYSNLQLQNGLLQSDQELFNSSDADIIALINNFSSNQTLFFENFKASMIKMGNLGVLTGSQGEIRTQCNSVNGNSSGLATQATKESSQDGMVSSI 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01895 354 ProSiteProfiles Plant heme peroxidase family profile. 28 331 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca08g01895 354 PANTHER PEROXIDASE 8 339 - -
Cca08g01895 354 CDD secretory_peroxidase 28 330 IPR033905 GO:0004601|GO:0042744
Cca08g01895 354 Gene3D - 33 331 - -
Cca08g01895 354 PANTHER PEROXIDASE 72-RELATED 8 339 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca08g01895 354 MobiDBLite consensus disorder prediction 334 354 - -
Cca08g01895 354 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca08g01895 354 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca08g01895 354 PRINTS Plant peroxidase signature 102 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca08g01895 354 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca08g01895 354 PRINTS Plant peroxidase signature 140 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca08g01895 354 PRINTS Plant peroxidase signature 188 200 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca08g01895 354 PRINTS Plant peroxidase signature 247 262 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca08g01895 354 PRINTS Plant peroxidase signature 263 280 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca08g01895 354 PRINTS Plant peroxidase signature 305 318 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca08g01895 354 ProSitePatterns Peroxidases proximal heme-ligand signature. 189 199 IPR019793 -
Cca08g01895 354 Pfam Peroxidase 45 284 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca08g01895 354 Gene3D Peroxidase, domain 2 166 310 - -
Cca08g01895 354 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca08g01895 354 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca08g01895 354 PRINTS Haem peroxidase superfamily signature 140 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca08g01895 354 PRINTS Haem peroxidase superfamily signature 189 204 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca08g01895 354 PRINTS Haem peroxidase superfamily signature 249 264 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca08g01895 354 SUPERFAMILY Heme-dependent peroxidases 28 331 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01895 Cca-Chr8 51517336 51521239 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g01895 11 352 Peroxidase AT5G06730 57.143 5.09e-131 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01895 K00430 - gmx:100814455 556.599