Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01829 ATGGTGATAATGGAGGGTGGTTCCAAGTGGTTACTCTATGTTGCTGGTGGTCTTCTAATCCTGAGATTTTTGCTGAGGAATGTGAATTGGTTTCTCTATGAATACAAGCTTGGTGGGAAGCAATACTTTCTTCCTCCAGGTGACATGGGCTGGCCCTTAATTGGAGACATGTGGTCCTTTCTCAGTGCTTTCAAGACCAACAACCCTGattccttcattgattcattttactctaaGTATGGAAAAACTGGCATATACAAGGTGTTAATGTTTGGAAATCCAAGTGTAATCGTGACAACACCTGAAGCATGCAAAAAAGTGTTGACAGATGATGACAAATTCACTCTTGGATGGCCTCGTTCTACAGTAGAACTCATGGGAGAAAAGTCATTCATTTCAATACCTGCTGATGAACACAAACGCCTCAGGCGTTTAACATCTGCTTCAATCAATGGCTATGAAGCACTCTCTGTGTACATCACATTCATTGAAAAAGTTGTCATAAGTTCATTGGAGAAATGGACCACCATGGGGGACATTGAGTTTTTGACTCAAATGCGCAAGCTTACCTTCAAAATCATTATACATATTTTCCTTAGCTCAGAAAGCGAGTCTGTCATGGAGGCTTTGGAAAGAGAATACACAATACTTAACCTTGGTGTTAGAGCCTTGCGTATTAACCTTCCCGGATTTGCATTCCATAAAGCATTCAAGGCTAGGAAAAATCTATTGGCTGTATTTCAAACTATTGTGGATAAAAGAAGAAAGGAAAGGATCGGAAAAGCACCCGCCAAGAAAGCCAAAGATATGATGGATGCTCTGCTAGATGTTGAAGATGAAAATGGAAGAAAATTGGGTGATGATGATGTCATTGATATCATGTTGATGTACTTGAATGCTGGTCATGAATCCTCAGGACATATTACCATGTGGGCCACCTATTTCCTCCAAAGGCATCCAGAATATTTCAAGAAGGCTAAGGAAGAACAAGAAGAAATCATAAGGAAGAGGCCTCCAACACAGAAAGGATTGGTACTGGAGGAAGTTAGGAAGATGGAATATCTCTCAAAGGTGATTGATGAAACAATGAGGGTTGTCACCTTCTCACTAATGGTCTTTAGGGAGGCAAAATCTGATGTCAATATCAATGGTTACTTGATTCCAAAAGGTTGGAAAGTAATGGCCTGGTTCAGGTCGGTTCACCTTGACAACGACATATATCCTAATCCAAAGGAGTTTAATCCCGAGAGATTTAGTGAGGTGCGCAAGGCTGGAGAATTTCTTCCCTTTGGAGCTGGAACTAGACTGTGCCCTGGGAATGATCTTGCCAAGCTTGAAATCTCTGTTTTCCTTCATCATTTTCTGCTGAATTATGAGCTTGAACAGCTTAATCCAGATGCCCCTCTGAGATTCTTACCACACACAAGGCCCATAGACAATTGCATGGCAAGGATCAAGAGAGTCAAGTGA 1470 0.4075 MVIMEGGSKWLLYVAGGLLILRFLLRNVNWFLYEYKLGGKQYFLPPGDMGWPLIGDMWSFLSAFKTNNPDSFIDSFYSKYGKTGIYKVLMFGNPSVIVTTPEACKKVLTDDDKFTLGWPRSTVELMGEKSFISIPADEHKRLRRLTSASINGYEALSVYITFIEKVVISSLEKWTTMGDIEFLTQMRKLTFKIIIHIFLSSESESVMEALEREYTILNLGVRALRINLPGFAFHKAFKARKNLLAVFQTIVDKRRKERIGKAPAKKAKDMMDALLDVEDENGRKLGDDDVIDIMLMYLNAGHESSGHITMWATYFLQRHPEYFKKAKEEQEEIIRKRPPTQKGLVLEEVRKMEYLSKVIDETMRVVTFSLMVFREAKSDVNINGYLIPKGWKVMAWFRSVHLDNDIYPNPKEFNPERFSEVRKAGEFLPFGAGTRLCPGNDLAKLEISVFLHHFLLNYELEQLNPDAPLRFLPHTRPIDNCMARIKRVK 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01829 489 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g01829 489 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g01829 489 PRINTS E-class P450 group I signature 427 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g01829 489 PRINTS E-class P450 group I signature 437 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g01829 489 Gene3D Cytochrome P450 37 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g01829 489 Pfam Cytochrome P450 45 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g01829 489 PANTHER CYTOCHROME P450 26 15 482 - -
Cca08g01829 489 SUPERFAMILY Cytochrome P450 42 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g01829 489 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 430 439 IPR017972 GO:0005506|GO:0016705
Cca08g01829 489 PANTHER ENT-KAURENOIC ACID OXIDASE 2 15 482 - -
Cca08g01829 489 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g01829 489 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g01829 489 PRINTS P450 superfamily signature 428 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g01829 489 PRINTS P450 superfamily signature 437 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01829 Cca-Chr8 50671101 50676179 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g01829 10 488 Cytochrome P450 AT2G32440 63.542 0.0 656
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01829 K04123 - gmx:100781238 757.288