Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01809 ATGGAGGAGACATTTGTTCCGTTTCGTGGAATTAAAAATGATCTTCAAGGGAGATTGATGTGTTACAAGCAAGACTGGATTGGTGGTCTCACGGCAGGCTTCAGGATATTAGCCCCTACCACGTATATATTCTTTGCATCAGCAATTCCTGTTATTTCATTTGGAGAACAATTGGAAAGAGACACAGATGGAGTACTCACTGCAGTGCAAACATTAGCATCTACTGCATTGTGTGGAATTATACACTCTATTATAGGAGGCCAGCCTTTGCTGATTCTTGGAGTAGCAGAACCAACTGTAATTATGTATACATTCATGTTCAACTTTGCCAAAAGTAGGCCAGAATTGGGTTCAAAACTCTTTCTAGCATGGAGTGGATGGGTATGCATGTGGACTGCCATCTTGTTGTTCCTACTGGCTATCTTAGGAGCTTGCTCCATCATCAACAGGTTCACTCGTGTTGCAGGGGAACTGTTTGGCCTTCTTATTGCAATGCTTTTCATGCAAGAGGCTATTAAAGGACTCATCCATGAGTTTCACATACCTGAGAGGGCAGACCCAACATCACCTGAGTTTCAATCTTCATGGAGATTTGGAAATGGTATGTTTTCTTTGGTTCTGTCTTTTGGTCTCCTGCTTACAGCATTGAGAAGCCGAAAAGCAAGGTCTTGGCGATATGGATCAGGATGTTTACGGGGCCTCATAGCGGATTATGGTGTCCCGTTGATGGTTCTATTGTGGACCGGCATTTCTTATATTCCCGCTGGAAGTATTCCAAAAGGAATCCCTAGGCGTCTCTTCAGTCCAAATCCATGGTCCCCTGGTGCATTTGAAAACTGGACTGTCATAAAGGACATGCTGAATGTGCCAGTTCTCTATATTATTGGAGCGTTTATTCCAGCAACAATGATTGCTGTTCTTTATTATTTTGACCATAGTGTGGCATCTCAGCTTGCTCAGCAGAAAGAGTTCAATTTAAGAAAGCCACCTTCTTTCCATTATGATTTACTTCTTTTGGGATTCATGGTTATATTATGTGGTCTAATTGGAATTCCCCCGTCAAATGGTGTCATTCCACAATCTCCAATGCATACCAAAAGTTTAGCTACACTGAAGCACCAGTTACTTAGAAACCGACTTGTTGCAACAGCACGAAGCTGTATGAAAAAGCAAGAAAACTTGGGACAAGTATATGGAAGTATGCAAGATGCTTACTGGCAGATGCAAACCCCTCTAGTTCACCAGGAACATTCCTCGCAGGGACTTAATGAGATGAAAGAGTCAACTATCCAATTAGCATCAAGCATGGGGAGTATAAATGCTCCAGTTGATGAGTCAATATTTGATGTGGAGAAGGACATTGATGACTTATTGCCTGTTGAGGTCAAAGAACAACGAGTGAGCAACCTGCTTCAATCTTTGATGGTAGGAGGATGTGTAGCAGCAATGCCTTTCCTGAAAATGATTCCAACTTCTGTACTCTGGGGCTATTTTGCTTTCATGGCCATTGAAAACTTACCTGGCAACCAGTTTTGGGAACGGATTTTATTAATTTTCACTGCTCCAAGCAGAAGATACAAAGTCTTGGAGGAGTTCCATGCAACTTATGTGGAAACCGTACCATTCAAGACAACTGCAGTATTTACTCTCTTCCAGACTGCTTACTTGCTTGTTTGCTTTGGTATCACTTGGGTTCCAATAGCTGGGGTTCTATTCCCATTGATGATCATGCTTCTGGTTCCTGTGAGGCAATACATTCTGCCCAAGTTTTTCAAAGGAGCACACCTTCAAGATTTAGACGCTGCAGAATATGAAGAAGTGCCTGCTTTGTCATTCAACCTAGCGACTGAAGGGGACTTGAGCAGGGCAGCTTCCTTTGCAGATGATGGAGAGATTCTTGATGGAGTAATTACTAGAAGCCGGGGTGAGGTTAGACGTGTTTGCAGTCCAAAGGTAATGAGCTCCACTCCAACACTATCCCAGGagttcacaagtgttcaaagtccaaagttcccagataaagtATACAGCCCTCGGATAAGCCAACTCAGAGGAAATCAAAGCCCTCGAGGTGTTGTGAGAGGACCATTTAGCTCTGCAGAAGCTAGGCCATCCCATTTGAGGAAAGGTGGTTGA 2136 0.4242 MEETFVPFRGIKNDLQGRLMCYKQDWIGGLTAGFRILAPTTYIFFASAIPVISFGEQLERDTDGVLTAVQTLASTALCGIIHSIIGGQPLLILGVAEPTVIMYTFMFNFAKSRPELGSKLFLAWSGWVCMWTAILLFLLAILGACSIINRFTRVAGELFGLLIAMLFMQEAIKGLIHEFHIPERADPTSPEFQSSWRFGNGMFSLVLSFGLLLTALRSRKARSWRYGSGCLRGLIADYGVPLMVLLWTGISYIPAGSIPKGIPRRLFSPNPWSPGAFENWTVIKDMLNVPVLYIIGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRKPPSFHYDLLLLGFMVILCGLIGIPPSNGVIPQSPMHTKSLATLKHQLLRNRLVATARSCMKKQENLGQVYGSMQDAYWQMQTPLVHQEHSSQGLNEMKESTIQLASSMGSINAPVDESIFDVEKDIDDLLPVEVKEQRVSNLLQSLMVGGCVAAMPFLKMIPTSVLWGYFAFMAIENLPGNQFWERILLIFTAPSRRYKVLEEFHATYVETVPFKTTAVFTLFQTAYLLVCFGITWVPIAGVLFPLMIMLLVPVRQYILPKFFKGAHLQDLDAAEYEEVPALSFNLATEGDLSRAASFADDGEILDGVITRSRGEVRRVCSPKVMSSTPTLSQEFTSVQSPKFPDKVYSPRISQLRGNQSPRGVVRGPFSSAEARPSHLRKGG 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01809 711 PANTHER ANION EXCHANGE PROTEIN 1 697 IPR003020 GO:0005452|GO:0006820|GO:0016020
Cca08g01809 711 MobiDBLite consensus disorder prediction 679 711 - -
Cca08g01809 711 Pfam HCO3- transporter family 7 180 IPR011531 GO:0006820|GO:0016021
Cca08g01809 711 Pfam HCO3- transporter family 460 550 IPR011531 GO:0006820|GO:0016021
Cca08g01809 711 Pfam HCO3- transporter family 202 373 IPR011531 GO:0006820|GO:0016021
Cca08g01809 711 PANTHER BORON TRANSPORTER 3-RELATED 1 697 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01809 Cca-Chr8 50421194 50427336 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g01809 1 690 Antiporters AT3G62270 77.489 0.0 1107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01809 K24194 - gmx:100795777 1304.66