Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01762 ATGATTTCCATTCCCACAGCCTCACTTGCTTCATTTAGCCAAAGAGAAGAAATGGTTGACCGTGCAGACAAGGTTCTTATAAGAGAATATAATGAAAAGCAAGATGCTAAAATGGTGAGAAAGCTAGAGAGGAACTGTGACATAGGGACTAAGAAGGTGGTCTCCATTTTATCCAGCATCACGGATGACCCTTTATTTAGGATTAGGTTTTTCCCCCTTCATGTTATGCTGGTAGCTGAGCTTCTTGAGAGCAGGGAGCTTGTTGGAGTGATTCGGGGAATCATTAAGAATGTGGGGACTCTTTCTGGGTCATTCTTGAAGATGGGTTGCATCTTAGGCCTCAGAGTCTCTCCTACTTATAGGAGAAAGGGGGTTGCACTAAGACTTGTCACTGCAATTGAAGAATGGATGGTGAGAAATGGAGCTGAGTATGCATTCCTCGCAACAGAAAAGAGCAACGATGCATCTAAAAACCTATTTACTATCAAATGCAACTATGTGAATCTAAGTTCACTTGTCATATTTGTCCAACCAACTAGTTCCCTCACAAAGCAAATTTCCAAGGATATAAAAATAGAGAAAGTGAACATAGATCTAGCAATTTCGTTATATAGAAGAACCTTGAGGACCAAAGATTTGTATCCATTAGACATGGATGTTATTCTAAAAGAAAAGCTAAGCCTTGGCACATGGGTGAGCTATTACAAAGAAGAGGGATTGCTCAACTTGTTGAGCAAAGTAAACAATGAAGATCTTATTATTAGCAATGAAACCTCAAGCTCATGGGTTATTTTTAGCATATGGAACACTTGTGAAGCTTATAAGCCTCATCAAGTTAGAAAGTCTCAACTACTAAAGTTTCTTCTTGCAACCTTGAATCATGCAAAAGAGAAAGTTTTCCCTTGTCTCAAAATGTCGGTGAGTGACTCACTTTGTAGGTCTTTTGGGTTTCTCTTCCTCTATGGAATCCATGGAGAGGGAGAGAATCTTGGACAACTCATTGAATCAATGTGGAGGTTCACATCAAGAGTGGGAGAAGGTATGAGGGATTGTAGAGTGGTTATAGCTGAGTTAGGGTTTGGTGATCCACTTGCCAACCATGTTCCTCAAACAACTTCTATGTCATGCATCGATGATCTGTGGTACACAAAGAAGCTTTCAAGCCATGGTGATGAAAATGTTGGTTTGATAAAAGAACAAATGGGAAATGTGTTTGTTGACCCTAGAGATTTTTAA 1236 0.3964 MISIPTASLASFSQREEMVDRADKVLIREYNEKQDAKMVRKLERNCDIGTKKVVSILSSITDDPLFRIRFFPLHVMLVAELLESRELVGVIRGIIKNVGTLSGSFLKMGCILGLRVSPTYRRKGVALRLVTAIEEWMVRNGAEYAFLATEKSNDASKNLFTIKCNYVNLSSLVIFVQPTSSLTKQISKDIKIEKVNIDLAISLYRRTLRTKDLYPLDMDVILKEKLSLGTWVSYYKEEGLLNLLSKVNNEDLIISNETSSSWVIFSIWNTCEAYKPHQVRKSQLLKFLLATLNHAKEKVFPCLKMSVSDSLCRSFGFLFLYGIHGEGENLGQLIESMWRFTSRVGEGMRDCRVVIAELGFGDPLANHVPQTTSMSCIDDLWYTKKLSSHGDENVGLIKEQMGNVFVDPRDF 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01762 411 CDD NAT_SF 76 147 - -
Cca08g01762 411 Pfam Acetyltransferase (GNAT) family 75 165 IPR000182 GO:0016407
Cca08g01762 411 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 21 160 IPR016181 -
Cca08g01762 411 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 21 411 - -
Cca08g01762 411 Gene3D - 27 178 - -
Cca08g01762 411 PANTHER N-ACETYLTRANSFERASE HLS1-LIKE ISOFORM X1-RELATED 21 411 - -
Cca08g01762 411 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 25 227 IPR000182 GO:0016407
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01762 Cca-Chr8 49742143 49744244 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Cca08g01762 Acetyltransf_1 1.1e-13 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01762 - - gmx:100808694 699.893
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g01762 08 49742143 49744244 Cca08g01762 08 49742143 49744244 ECH
Cca11g02698 11 54396342 54398263 Cca08g01762 08 49742143 49744244 PCT