Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01758 ATGGTCGACCCCAAACCCTGTGAAACAAAAACAAAGGCCAGAAACACATCCTATTTTCATCGACAATCCGGCCCATGCAACGCGCACAACGTAAACGACAAGAAGGAAACAGCCACAGCAACACCCGAATCCTACCCTCCGATGCCGGAATCAGAACCACCCTTCCCCTACCCCTCCTCGGAATTCGGGAGCAATGATTACACATCATCATGGAGCGACGAAGGCTCGGGTTCCGAGCCCAGCACcggcggcggcggcggcggcggcgctggcggcTCCTACACCTCGTTCTCCTCCGCCTTCAAGGACATCCTGAAGGGCACCGTCCGCGGCCACTCCCTGACAATGCCGGAGCACGGGGACCCGAAGTCGAAGCACCAGCAGCACGCGGTGCGGCAGATATGCTCCCACACGGACTACCCCGACGTGTGCCTCTCCACAGTGGTGCCGTTCCTCGGCCACCACCTGGACGTCATGAACATCCTGGAGGCGGCCATCAAGGCCTGCTCCTTCCAGACCAACTTCACGCTTTCCAAGGTCATCAAACACATGTCGCGGTCGTCAGAGATGGCGACCGCGCTAGCTAGCTGCAAGGAGCAGTATCATGACGCGCTGGAGAATCTCCAGCGCGCCATGGACGCTATCCCCTTGCGGGACCTTGGCACCGTCACCGTGATGCTGAGCGCGGTGATGGCGGACGTTTCGGCGTGCGAGAGTGGGTTTGAGGATCTGAAGTCGCACTCGCCCATGGGGAACTCGGAAGGGTTGGTTACCATTACGGCTAGTAATTGCCTCTCCATTGCGGCTATCATTCCTTACTAG 822 0.5596 MVDPKPCETKTKARNTSYFHRQSGPCNAHNVNDKKETATATPESYPPMPESEPPFPYPSSEFGSNDYTSSWSDEGSGSEPSTGGGGGGGAGGSYTSFSSAFKDILKGTVRGHSLTMPEHGDPKSKHQQHAVRQICSHTDYPDVCLSTVVPFLGHHLDVMNILEAAIKACSFQTNFTLSKVIKHMSRSSEMATALASCKEQYHDALENLQRAMDAIPLRDLGTVTVMLSAVMADVSACESGFEDLKSHSPMGNSEGLVTITASNCLSIAAIIPY 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01758 273 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 129 270 IPR035513 -
Cca08g01758 273 Coils Coil 194 214 - -
Cca08g01758 273 CDD PMEI-like_2 130 271 - -
Cca08g01758 273 Pfam Plant invertase/pectin methylesterase inhibitor 130 267 IPR006501 GO:0004857
Cca08g01758 273 SMART PMEI_2 126 267 IPR006501 GO:0004857
Cca08g01758 273 PANTHER PECTINESTERASE INHIBITOR-LIKE 122 271 - -
Cca08g01758 273 ProSiteProfiles HD-GYP domain profile. 158 273 IPR037522 -
Cca08g01758 273 MobiDBLite consensus disorder prediction 11 39 - -
Cca08g01758 273 MobiDBLite consensus disorder prediction 61 79 - -
Cca08g01758 273 Gene3D Invertase/pectin methylesterase inhibitor family protein 127 271 IPR035513 -
Cca08g01758 273 TIGRFAM PME_inhib: pectinesterase inhibitor domain 124 268 IPR006501 GO:0004857
Cca08g01758 273 MobiDBLite consensus disorder prediction 1 91 - -
Cca08g01758 273 PANTHER PECTINESTERASE INHIBITOR-LIKE 122 271 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g01758 121 269 Carbohydrate Esterase AT5G53370 26.036 5.46e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01758 - - gmx:102664156 257.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g01758 08 49687741 49688729 Cca08g01758 08 49687741 49688729 ECH