Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01756 ATGGAGACCCAACACCAACAGGAAGTTATAGTAGGAAAGGTATGTGAAATCTATGAGAAAATCTCCAACCTAGGAGACCTCAACCCCTCCAACCATGTCAACAACCTCTTCACCCAACTTGTCACCATTTGCACCACCCCATGTCAATTAGATGTTACTCGACTAAGCAAACAAGTTAGAGAAACCATCGCTAACCTAATTAGGCTTTGTGGCAAAGCTGAGGGACTTCTTGAGAACCATTACTCAACCCTAATAGGATCACATGATACCCCCTTAAACCACATGAAATTCTTCCCCTACTACTCCAACTACCTCAAACTGAGCCATTTGGAGTTCACCATGCTCACCACACACTGCACCCAAGTCCCCACCCAACTAGCCTTTGTGGGCTCAGGCCCACTTCCTCTCACCTCAATCATGTTGGCCACACATTACCTTAGGCACACATGCTTCCACAACTACGACATGGATCCTTTGGCAAATGCCAAGGCTCGTGACTTGGTCTCATCGGATCCTGACTTGTCAAAGAGAATGTTCTTCCACACTAGTGACATTTTAAGTGTGTCAAACCTCAAGGACTACAACGTGGTGTTTTTGGCCGCCCTTGTGGGCATGGACAAGAAGGAGAAAGCAAAAGTCATCAATCACTTGGCCAAATTCATGGCTCCTGGAGCATTTCTGGTGTTGAGGAGTGCTCATGGAGCTCGTGCCTTCCTCTACCCGGTGGTTGATCCTTGTTCTGATCTCAAAGGTTTTGAAGTTCTCTCGGTTTTTCACCCCACTGATGAGGTTATTAACTCGGTCATTGTTGCACGCAAGCACTCGGTGAATCAAGGGGTTTATACACCAGTGTTGGCTAGCAAATGTTCTGGGGTTGAAGGCTTTAATCCCTTCAACCATGGGAACGTTATTGAGGAGTTGACAGTTGATGAGCAGGCTTGA 942 0.4671 METQHQQEVIVGKVCEIYEKISNLGDLNPSNHVNNLFTQLVTICTTPCQLDVTRLSKQVRETIANLIRLCGKAEGLLENHYSTLIGSHDTPLNHMKFFPYYSNYLKLSHLEFTMLTTHCTQVPTQLAFVGSGPLPLTSIMLATHYLRHTCFHNYDMDPLANAKARDLVSSDPDLSKRMFFHTSDILSVSNLKDYNVVFLAALVGMDKKEKAKVINHLAKFMAPGAFLVLRSAHGARAFLYPVVDPCSDLKGFEVLSVFHPTDEVINSVIVARKHSVNQGVYTPVLASKCSGVEGFNPFNHGNVIEELTVDEQA 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01756 313 Pfam Nicotianamine synthase protein 5 276 IPR004298 GO:0030410|GO:0030418
Cca08g01756 313 Gene3D Vaccinia Virus protein VP39 8 275 IPR029063 -
Cca08g01756 313 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 2 278 IPR004298 GO:0030410|GO:0030418
Cca08g01756 313 PANTHER NICOTIANAMINE SYNTHASE 3 5 313 IPR004298 GO:0030410|GO:0030418
Cca08g01756 313 PANTHER NICOTIANAMINE SYNTHASE 5 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01756 Cca-Chr8 49677781 49679038 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g01756 6 312 Nicotianamine Synthase Gene Family AT1G09240 54.921 5.32e-115 333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01756 K05953 - gmx:100814069 532.332