Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01746 ATGTCTGACAAGACCCTTGGGTCCAATAATTCCAGGGATAAGGAAATATTACCAGTTCAGCTGCCTGGCGGAACTGCACTTCACTTTCTCTTCGAGATGGCAAAGTCGAAGAACCACACAGCTCACAACCAGTCCTACAAGGCCCACAAAAATGGCATTAAGAAACCCAAGAGGCATCGCCACACTTCCACCAAAGGGATGGATCCCAAGTTTCTGAGGAATCAGAGGTATGCGAGGAAGCACAACAAGAAGAGTGGGGAAACTGCCACCGAGGAAGAGTAA 282 0.4858 MSDKTLGSNNSRDKEILPVQLPGGTALHFLFEMAKSKNHTAHNQSYKAHKNGIKKPKRHRHTSTKGMDPKFLRNQRYARKHNKKSGETATEEE 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01746 93 Pfam Ribosomal L29e protein family 35 74 IPR002673 GO:0003735|GO:0005840|GO:0006412
Cca08g01746 93 MobiDBLite consensus disorder prediction 38 93 - -
Cca08g01746 93 PANTHER 60S RIBOSOMAL PROTEIN L29 33 93 - -
Cca08g01746 93 MobiDBLite consensus disorder prediction 42 64 - -
Cca08g01746 93 Gene3D - 33 93 - -
Cca08g01746 93 PANTHER 60S RIBOSOMAL PROTEIN L29 33 93 IPR002673 GO:0003735|GO:0005840|GO:0006412
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g01746 33 93 Cytoplasmic Ribosomal Protein Gene Family AT3G06700 85.246 1.91e-33 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01746 K02905 - gmx:100803210 131.724
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g01746 08 49434547 49439687 Cca08g01746 08 49434547 49439687 ECH