Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01736 ATGGGAGTTGAAAAAGAAGGGACGAAAAGTGGAGGAGGTTATGTTGGTGGTTTTTTCCAGTTGTTCGACTGGACCTCAAAATCTCGTAAGAAATTATTTGCTACCAAGTCAGACTTGCCAGAGCATTTAAAACATGGAAAAAAAGTCGATTACAGTATGGCATTGTCACAGTCCTCCTATCTGGTTGATGAAGATGAAAATGGAGTAGGAGCAAGTGTTAGAGGAAGTTGTGATCATAGTTATGCTTCTTCTGTAACAGATGATGAAGCATGTGGAACAAGGGCCCCTGGTGTTGTTGCCAGGCTTATGGGATTAGATTCCTTGCCTCCTTCCAGTTTTTCTGATCCTTATTCTACCCCATATTTTGATACCCGATCCCTTCAAGACGCTCAGTACTTCAAGAACAACCAGCATGACCATCAGACCCCATATTCTGGAAAGCTGGTTGAAAAGGTTGAGGGATCTTCTAGGAATTTCATGGTTGAAAAGGCTGAGGGCTCTTCTAGGAACTTCATGGAGCCAAAGCCGCAAAAGGCCCTTACCAGGCCAATTGAAAAGTTCCAAACAGAAGTATTGCCTCCAAAATCAGCTAAATCAATTCCTGTTACACACCATAAACTTTTGTCCCCCATTAAGGGTCCTGGCTTTGTTCCTACCAATAATGCTGCTTATATAATGGAGGCTGCAGCAAGAATTATTGAGCCTGGATCCCAAGCCAGTACCAAGGCTAAGACACCTCTAGTTTCATCATCAACACCATTGAGAGTTAGAGATCTTAAGGATAAGGTGGAGGCTTCACAAAAAGGACCTTTAATTGGACCATCCTCCATGACCTCTAGAACTCGAGATCTGAAAGAGAAAAGAGAATTTTCTCAAAGAACTACTAGGCTTTTAGAATCTTCTCAAAGATCAGCCGAATCAAATGCTGCCAAGTATCTAAAAGGACAGTCTTTGAACAGAAGCTGGAATGGCTCTGCGGATACATCCATCAAATCTCCTACACATGAGGAAGAAACTTCTTCTATGAAGAATAAGGGGAAGTCCATTTCACTTGCAATTCAAGCGAAAGTGAATGTTCAAAGAAGGGAAGGTTTGAGTTTGACTGGTGGCAGAAGTTCAATGGGCCATAAAGAGCATTCAGATGTTAAATCCAATCAACCAATGAAGGCAAATAATGTTCAGAAGAATTTGCATAAGAAATCTTCTGGTCAGAATTCATCTGGTGCGCTCAGACAGAATAATCTGAAACAGAATTATTCAATTGACAAAGACAAAGTACCATCAAAGCCATTGGTTACCAATTCACACATTAGGAAAGTTTCCACTGCAGATTCCCCTTATGGACGCCATAGAAGCTCTAGTAATAAATCTGTTGCAAAATCTAAAGTTGGTTCCAGAAAGTCATCAATGGAGGTGACAGATAGTGAAAAGGAAGTTTTGTATACCAGCACAAACAATTTTCCTAGAAAGAAAAGATCTACTGACAAGGACTGGAATGATAGGGTTGTGGACAATTTGTTCATTGAAAAAACTCAGAAGCCTGTTAAGTCTAACCTTGTGAGTAATAAACAACATAGTTGGGGCGAAGAAGTTAAAAAGAAAGACATGGATGTAGTTTCATTTACATTTACCACTCCATTAACAAGGAGCAATCCAGGTTTTGAGACACCTGGACAAGCTGGCCAGAATAATAATGGTCTTTCCTTGGATCAACGCATTAAACGAGTGTTGCTTGATCCAGAAAACACAAGATCTCCAGTTGGATACAATGTGATTGGTGGTGATGCCTTAGGTATCTTATTGGAACAGAAGTTGAGGGAATTAACATGTATGGAAACCACTTGTCATGACTCTTCTAAAATGAGGCACCCTGCCACTAGTGCACCAATGTCAGTTGATCAAGTAACCGGCCTTAATATGGTTAACCTCGACCTAAAGTTGCAACAGAAAAAAGACCAAGATGTGTTAAGCAGCAACTATGATTCAGACATCTCCTCTGCCGGTCCTCTTGAATTATCATTGAAGCATAACTCATGGATTGATGAGATGGAACCACAGTTACTCAATTGCCGCCACCCAAGTCCAATCTCTGTTCTCGAGCCTTCTTTTTCAATTGAAAGCTGTGAATCTTCATTCAGTACGGATGTTACTAGTACAGAAGGTAGAAGTAAGCTGTGCTCGTCTGTTCAAACTCAAGAAGTTCATAGCTTGAATTTTTCAAGGAAGTTCTATCCTTGTGAATCTGATGCAGAGTTATCTGATTCAGCTTCTTCAACATCAGCTGGGAACATAGTGAAGAAGAAGCACACAAGTACATTTTCTGTCACAAGGTTTGGAGGCTCCAAAACATGGGAGTTGGACTATGTGAAAGACATATTGTGTAATGTTGAGTTGATGTATATTGACTTTTCCCTTGGACAAGCTAGCGAGGTTATGAACTCTCATCTATTCAACCAGTTGGAAGGCCGCAAGGGAGGGTTTAAGTGCGACGACGAGTCTATGATGAGAAGGAAAGTTACATTTGATTGTGTGAGTGAATGCTTGGACTTGAGATGCAGGCGTTATGTAGGGGGAGGATACAGAATGTGGAGCAAAGGGTTTGAAATGGTGAAAAGAAAAGAATGGTTGGCAGAAGATGTGTACAAGGAGATCACAGGTTGGAGTGGAATGGGAGATTCAATGGTTGATGAGCTTGTGGACAAGGACATGAGCAGCCAGTATGGAAGATGGCTAGATTATGAGATTGATGCTTTTGAACTCGGATCAGAGGTTGTGGACCAAATTTTTAATTCTTTGGTTGATGATGTTGTCACTGAAATCTTGCAAATGTAA 2832 0.4089 MGVEKEGTKSGGGYVGGFFQLFDWTSKSRKKLFATKSDLPEHLKHGKKVDYSMALSQSSYLVDEDENGVGASVRGSCDHSYASSVTDDEACGTRAPGVVARLMGLDSLPPSSFSDPYSTPYFDTRSLQDAQYFKNNQHDHQTPYSGKLVEKVEGSSRNFMVEKAEGSSRNFMEPKPQKALTRPIEKFQTEVLPPKSAKSIPVTHHKLLSPIKGPGFVPTNNAAYIMEAAARIIEPGSQASTKAKTPLVSSSTPLRVRDLKDKVEASQKGPLIGPSSMTSRTRDLKEKREFSQRTTRLLESSQRSAESNAAKYLKGQSLNRSWNGSADTSIKSPTHEEETSSMKNKGKSISLAIQAKVNVQRREGLSLTGGRSSMGHKEHSDVKSNQPMKANNVQKNLHKKSSGQNSSGALRQNNLKQNYSIDKDKVPSKPLVTNSHIRKVSTADSPYGRHRSSSNKSVAKSKVGSRKSSMEVTDSEKEVLYTSTNNFPRKKRSTDKDWNDRVVDNLFIEKTQKPVKSNLVSNKQHSWGEEVKKKDMDVVSFTFTTPLTRSNPGFETPGQAGQNNNGLSLDQRIKRVLLDPENTRSPVGYNVIGGDALGILLEQKLRELTCMETTCHDSSKMRHPATSAPMSVDQVTGLNMVNLDLKLQQKKDQDVLSSNYDSDISSAGPLELSLKHNSWIDEMEPQLLNCRHPSPISVLEPSFSIESCESSFSTDVTSTEGRSKLCSSVQTQEVHSLNFSRKFYPCESDAELSDSASSTSAGNIVKKKHTSTFSVTRFGGSKTWELDYVKDILCNVELMYIDFSLGQASEVMNSHLFNQLEGRKGGFKCDDESMMRRKVTFDCVSECLDLRCRRYVGGGYRMWSKGFEMVKRKEWLAEDVYKEITGWSGMGDSMVDELVDKDMSSQYGRWLDYEIDAFELGSEVVDQIFNSLVDDVVTEILQM 943
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01736 943 MobiDBLite consensus disorder prediction 434 466 - -
Cca08g01736 943 MobiDBLite consensus disorder prediction 280 294 - -
Cca08g01736 943 MobiDBLite consensus disorder prediction 366 387 - -
Cca08g01736 943 MobiDBLite consensus disorder prediction 418 476 - -
Cca08g01736 943 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 1 941 - -
Cca08g01736 943 Pfam DUF761-associated sequence motif 83 114 IPR032795 -
Cca08g01736 943 MobiDBLite consensus disorder prediction 295 330 - -
Cca08g01736 943 PANTHER EXPRESSED PROTEIN 1 941 - -
Cca08g01736 943 Pfam Domain of unknown function (DUF4378) 785 935 IPR025486 -
Cca08g01736 943 MobiDBLite consensus disorder prediction 261 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01736 Cca-Chr8 49311694 49315739 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g01736 16 941 TRM (TON1 Recruiting Motif) Superfamily AT5G26910 31.456 3.21e-93 312
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01736 - - gmx:100777900 1520.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g01736 08 49311694 49315739 Cca08g01736 08 49311694 49315739 ECH
Cca11g02723 11 54602986 54608025 Cca08g01736 08 49311694 49315739 PCT