Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca08g01734 | ATGTCAGAAGGAACCAGTCTGGTGTTGGAGTCATCTGAAAATGGCACAGATTTGTCTCAGGATGACATTGGGACCATTGAGGAAACACCAGAGGAAACAATTTTGTCAAGACAAACTTCTGTCAACCTCGTCCCTTTTATTGGTCAGAGATTTGTTTCTCAGGAAGCAGCCTATGAATTTTATTGCAGTTTTGCTAAACAATGTGGCTTTTCAATTAGACGGCACCGAACTCGGGGGAAAGATGGGGTTGGCCGGGGAGTTACAAGGAGGGATTTTACTTGCCATCGTGGTGGATATCCCCAGATTAAACCTTCTGATGATGGGAAGGCGCAAAGGAACCGGAAATCATCACGCTGTGGTTGCCAAGCATACATGCGCATTGTGAAAAGAGCAGATTTTGATGTCTCTGAATGGCGTGTTACTGGTTTTAGGAACATTCACAATCATGAGTTGTTAAAGTCCAATGAGGTGCGACTTCTTCCAGCATATTGTCCTATATCTCCTGATGACAAGAGTCGTATATGCATGTTTGCTAAAGCTGGAATGTCAGTAAGGCAAATGCTAAGATTGATGGAGCTAGAGAAAGGTGTCAAACTTGGTTGTCTTCCTTTTACAGAGATAGATGTAAGAAACCTGTTGCAATCTTTCAGAAATGTGGATAGAGATAATGATGCTATTGATTTGATTGCTATGTGCAAGAGGTTAAAGGATGAAAACCAAAACTTCAAGTATGAATTCAAGATAGATAGTAATAACAGGCTTGAGCATATCGCATGGTCCTACAGCTCCTCCATTCAATCATATGAGGCATTTGGAGATGCTGTGGTTTTTGACACAACCTACCGAGTAGATGCCTATGACATGCTGTTGGGAATTTGGCTTGGTGTGGACAATAATGGAATGACTTGTTTCTTTAGTTGTGCACTTCTACGGGATGAAAATATGCAGTCTTTTTCATGGGCTCTAAAGGCTTTCTTGAGCTTCATGAAAGGAAAGGCTCCACAAACAATATTAACAGACCATAACATGTGGCTGAAAGAGACCATTGCTGTTGAATTGCCTGAAACTAAGCATGCCTTTTGTATATGGCATATTCTTTCTAAGTTCTCTGTTTGGTTTTCTTTACTTCTTGGATCACAATATGATGAGTGGAAATCTCAGTTCCATCGCCTCTACAATTTGGAATTGGTAGAGGATTTTGAAGAAGGCTGGAGGCAAATGGTTGATAAATATGGACTCCACGCAAATAAACATATTATTAGCCTATATTCGTTAAGGACATTTTGGGCTTTACCATTCTTGAGGCGTTACTTCTTTGCAGGATTGACCAGTACATGTCAGTCTGAGTCCATTAATGTTTTCATCCAACGGTTCTTGAGTGCACAGTCTCAACTAGAACGTTTTGTGGATCAAGTGGCAGATATTGTTGATTTTAATGACCGAGCTGGGGCAAAACAAAAGATGCAAAGGAAACTTCAGAAAGTGTGTCTAAAAACAGACACCACTCCCAGTCAGATGGAGGGTGCAAAGTGTTTTGGGTTCCTTGTCAAGAGCACATCAGCTGCAGCTGCCATCTATCGTTGGCGAGGCAATAGTTCATCTTCTGTTAATCACTTTCGGGGTGCAACTAGTAGGGATCCGCCTGAAAGGATGCAATTTTTGGAATCCATGGTTTCAACTTTTTTAGTGGAATCCATTGAAACTGAGGAACGGCTGGATGTTGCTTGCGACCAAATTTCCATGGTGCTATCACGCATCAAAACCCTTCCTAGGTCCACACATGGGGTGAATGACATAACATATAGTTATCCATCAGATTCACTGATATTGCCAGAGGTAGAAGATACTGATGGAATGATTCATGGCTTTACAATCACAAATCCCCATGATTCTATCACTGCAGGAAACCTAAAGGAGAGAAGGGTGAGAGATGGAGTCGATCTCACTAGGAAGCGTAGGCAATTCTCAGCGCCGTTGTGTGCTCAATATGGCCATGATGCATCTGATTGCTCAATAATGGCGGGTGACAATATGAGTGGAGATGCATTAGGCGATACACATGTTGCCGCCCGCTCTTTACACGAGCAAAAGGAATTGCAGACATTCGTTGCTTTTTGGAGCTTCTGCCTACGTTCTTGGCGGCTGAGGCCTTATGAGACCTCAAGAGGGCTCTCCTGGCTAGTTCTTTCCCCATATTGGATTTGGTTGTGCCATTTATGGGAGGGATCTCTTGGGAAGAGTTTCCTTGGCTGTTGCCAGCATCAAAAGAGACATTCTCAGAAGCCATTAAGATGTCTTGAAGAAGGGTAG | 2310 | 0.4264 | MSEGTSLVLESSENGTDLSQDDIGTIEETPEETILSRQTSVNLVPFIGQRFVSQEAAYEFYCSFAKQCGFSIRRHRTRGKDGVGRGVTRRDFTCHRGGYPQIKPSDDGKAQRNRKSSRCGCQAYMRIVKRADFDVSEWRVTGFRNIHNHELLKSNEVRLLPAYCPISPDDKSRICMFAKAGMSVRQMLRLMELEKGVKLGCLPFTEIDVRNLLQSFRNVDRDNDAIDLIAMCKRLKDENQNFKYEFKIDSNNRLEHIAWSYSSSIQSYEAFGDAVVFDTTYRVDAYDMLLGIWLGVDNNGMTCFFSCALLRDENMQSFSWALKAFLSFMKGKAPQTILTDHNMWLKETIAVELPETKHAFCIWHILSKFSVWFSLLLGSQYDEWKSQFHRLYNLELVEDFEEGWRQMVDKYGLHANKHIISLYSLRTFWALPFLRRYFFAGLTSTCQSESINVFIQRFLSAQSQLERFVDQVADIVDFNDRAGAKQKMQRKLQKVCLKTDTTPSQMEGAKCFGFLVKSTSAAAAIYRWRGNSSSSVNHFRGATSRDPPERMQFLESMVSTFLVESIETEERLDVACDQISMVLSRIKTLPRSTHGVNDITYSYPSDSLILPEVEDTDGMIHGFTITNPHDSITAGNLKERRVRDGVDLTRKRRQFSAPLCAQYGHDASDCSIMAGDNMSGDALGDTHVAARSLHEQKELQTFVAFWSFCLRSWRLRPYETSRGLSWLVLSPYWIWLCHLWEGSLGKSFLGCCQHQKRHSQKPLRCLEEG | 769 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca08g01734 | 769 | Pfam | FAR1 DNA-binding domain | 59 | 152 | IPR004330 | - | |
Cca08g01734 | 769 | Pfam | MULE transposase domain | 275 | 367 | IPR018289 | - | |
Cca08g01734 | 769 | PANTHER | FAR1 DNA BINDING DOMAIN, ZINC FINGER, SWIM-TYPE, MULE TRANSPOSASE DOMAIN, FHY3/FAR1 FAMILY-RELATED | 526 | 666 | - | - | |
Cca08g01734 | 769 | PANTHER | FAR1 DNA BINDING DOMAIN, ZINC FINGER, SWIM-TYPE, MULE TRANSPOSASE DOMAIN, FHY3/FAR1 FAMILY-RELATED | 8 | 498 | - | - | |
Cca08g01734 | 769 | PANTHER | PROTEIN FAR1-RELATED SEQUENCE 10-RELATED | 526 | 666 | IPR031052 | GO:0006355 | |
Cca08g01734 | 769 | PANTHER | PROTEIN FAR1-RELATED SEQUENCE 10-RELATED | 8 | 498 | IPR031052 | GO:0006355 | |
Cca08g01734 | 769 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca08g01734 | Cca-Chr8 | 49258872 | 49262996 | Dispersed |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | FAR1 | Cca08g01734 | MULE | 6.5e-21 | CL0219 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca08g01734 | - | - | gmx:100778434 | 971.074 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Cca08g01734 | 08 | 49258872 | 49262996 | Cca08g01734 | 08 | 49258872 | 49262996 | ECH |