Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01714 ATGGTTCTTTTTCCATCTCTTGTCAATGGATTGGCAAGAACAGTGTCGTTGAAGAAAGACAAGAGTTGTAGAAAGGATGGTGGAAGGAAAGCTGTGGAAGCATTGGCAAAGGAAGCAAAGAAAAATGAACTGTTATTGACTTCATCTGGAATTGTTAAGTCTCCCAAGGCCAACAATGTTGCCTCTGTGTTCACTAAGAAGGGCCAGAAAGGATTCAATCAGGACAAACTTATTGTTTGGGAGGAATTTGGTTGCCAAGAAGACATCATCTTCTGCGGAGTTTTTGATGGGCATGGCCATTGGGGGCACTTGGTATCCAAAAGAGTCAGGAAACTACTACCTTCTCTTTTGCTGTGCAACTGGCAGGAAAATCTGGCTGCAACATCACTTGACCTGGATTTTAAGATGGAAGCAGACAGGAACCTCCATAGATTTGACATATGGAAGCAGTCCTACATAAGCACTTGTGCTGCCATTGACCAAGATCTAAAGCAGCATGCTGGGATTGATTCCTTTCAAAGTGGTACTACAGCTTTGACAATTATCAAACAGGGTGAACATCTCACTATAGCAAATGTTGGTGATTCTAGGGCTGTCTTGGCAACCACTTCAGAGGATGGCACCTTGACTTCTGTTCAGCTTACCACTGACTTGAAGCCAAATTTACCAAAGGAGGCAGAGCGCATAATGCAATCTAGAGGGAGAGTATTTTGTATGGAAGATGAACCAGGAGTGTACAGGGTTTGGATGCCAAATGGTAAGACCCCAGGACTAGCAATATCTAGAGCATTTGGTGACTACTGTTTAAAGGACTTCGGACTAATCTCTGTACCAGATGTTACACAAAGAAAACTAACCACCAGGGATGAATTTGTCATCTTGGCAACAGATGGGGTATGGGATGTAATTTCCAACGAAGAAGCAGTGAGAATTGTTGGTTCAACACCAGATAAGGAAAAGGCAGCTGAAAGAGTGGTGAAATGTGCCATGCATGAGTGGAAACGTAAAAGAAGAGGCATTGCTATTGATGATATATCCGCTATTTGCCTCTTTTTTCACTCTCACCCTTCTCTTCACTAA 1080 0.4287 MVLFPSLVNGLARTVSLKKDKSCRKDGGRKAVEALAKEAKKNELLLTSSGIVKSPKANNVASVFTKKGQKGFNQDKLIVWEEFGCQEDIIFCGVFDGHGHWGHLVSKRVRKLLPSLLLCNWQENLAATSLDLDFKMEADRNLHRFDIWKQSYISTCAAIDQDLKQHAGIDSFQSGTTALTIIKQGEHLTIANVGDSRAVLATTSEDGTLTSVQLTTDLKPNLPKEAERIMQSRGRVFCMEDEPGVYRVWMPNGKTPGLAISRAFGDYCLKDFGLISVPDVTQRKLTTRDEFVILATDGVWDVISNEEAVRIVGSTPDKEKAAERVVKCAMHEWKRKRRGIAIDDISAICLFFHSHPSLH 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01714 359 CDD PP2Cc 59 352 IPR001932 -
Cca08g01714 359 Gene3D - 48 354 IPR036457 -
Cca08g01714 359 SUPERFAMILY PP2C-like 53 354 IPR036457 -
Cca08g01714 359 Pfam Protein phosphatase 2C 70 330 IPR001932 -
Cca08g01714 359 PANTHER PROTEIN PHOSPHATASE 2C 41-RELATED 1 357 - -
Cca08g01714 359 SMART PP2C_4 51 350 IPR001932 -
Cca08g01714 359 PANTHER ALPHABET, ISOFORM E-RELATED 1 357 - -
Cca08g01714 359 ProSiteProfiles PPM-type phosphatase domain profile. 60 352 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01714 Cca-Chr8 49032061 49036568 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g01714 1 353 PP2C-type Phosphatase Gene Family AT3G05640 60.000 1.35e-164 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01714 - - gmx:100814087 603.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g01714 08 49032061 49036568 Cca08g01714 08 49032061 49036568 ECH