Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01700 ATGCATAGAGATGTCAAGCCTCATAATGTTATGATAGATCATGAATTGCGTAAACTTCGCTTGATAGATTGGGGTCTTGCTGAATTTTATCATCCTGGAAAGGAATACAATGTTCGTGTGGCTTCAAGAATCGAGGCCATAATGCTGGCAGGGCTTGCATTCGAGAAGAAGTGGCAGAACAAACGCAAGGCAGAGGGAAAGCCTTATGATAAGCCCAATTTGGTCACTGGTTCCAATTTCCAGGTATGTTGGGAGAAGTTTGCAAGGTATTTTGAGGTGGAGTTAAGGGAAGTGGAGGTGAGAGAAGGGTACTACGTGATGGACCCTGCCAAAGCCGTTGAGCTGGTTGATGAGAACACTATTTGTGTGGCTGCAATCTTGGGTTCAACTTACAATGGAGAGTTCGAAGATGTGAAGCTCCTAAATGATCTACTTCTAGAGAAAAACAAGCAAACTGGATGGGATACACCTATCCATGTTGACGCTGCTAGTGGTGGCTTTATTGCTCCATTCCTTTATCCAGAACTAGAATGGGATTTCAGACTCCCATTGGTGAAGAGCATAAATATTGTTAGTGGCCACAAGTACGTGATGAATTAG 600 0.435 MHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRIEAIMLAGLAFEKKWQNKRKAEGKPYDKPNLVTGSNFQVCWEKFARYFEVELREVEVREGYYVMDPAKAVELVDENTICVAAILGSTYNGEFEDVKLLNDLLLEKNKQTGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINIVSGHKYVMN 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01700 199 SUPERFAMILY Protein kinase-like (PK-like) 1 42 IPR011009 -
Cca08g01700 199 ProSiteProfiles Protein kinase domain profile. 1 199 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca08g01700 199 Pfam Protein kinase domain 1 42 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca08g01700 199 Gene3D - 18 198 IPR015421 GO:0003824
Cca08g01700 199 SUPERFAMILY PLP-dependent transferases 45 198 IPR015424 -
Cca08g01700 199 Pfam Pyridoxal-dependent decarboxylase conserved domain 38 198 IPR002129 GO:0016830|GO:0019752|GO:0030170
Cca08g01700 199 PANTHER GLUTAMATE DECARBOXYLASE 43 197 IPR010107 GO:0004351|GO:0006536|GO:0030170
Cca08g01700 199 PANTHER GLUTAMATE DECARBOXYLASE 43 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01700 Cca-Chr8 48786328 48787577 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g01700 45 196 Calmodulin-binding Proteins AT5G17330 88.158 6.21e-96 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CK2 Cca08g01700 Pyridoxal_deC 2.1e-44 CL0061
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01700 K01580 - gmx:100782330 285.804