Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01686 ATGCTAGGGAACGACAAGGTGATTGGCGGCGTGAGTGTGTATGGTGGACTAGGTCTAACTCCAGGACGACTCTACTCGTTGGTTTATGTGGGTTCTGACGAGTACTCTTCCTCTCTCTGCTTGGAAGATTCATTGGATCCCAAGTCCATGAAAGGGAGGATTGTGGTGTGCGACAGAGACGTTAATTCAAGAACTGAGAAAGGGCAAGTGGTGAAGAAGGCGGGGGAAGTTGGCATGATTTTGACCAATAGACCCTTTGATGGCGAAGGTTTGGTTATTAAGTGCCATGTCCTCCCCGCCACCTCGGAGGGCTCCACCAGGGATGACGAGATTCGTAGATACATCTCTGACCTCCCCAAATAA 363 0.5014 MLGNDKVIGGVSVYGGLGLTPGRLYSLVYVGSDEYSSSLCLEDSLDPKSMKGRIVVCDRDVNSRTEKGQVVKKAGEVGMILTNRPFDGEGLVIKCHVLPATSEGSTRDDEIRRYISDLPK 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01686 120 SUPERFAMILY PA domain 26 89 IPR046450 -
Cca08g01686 120 CDD PA_subtilisin_like 2 116 - -
Cca08g01686 120 Pfam PA domain 26 86 IPR003137 -
Cca08g01686 120 Gene3D - 1 119 - -
Cca08g01686 120 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 2 117 IPR045051 -
Cca08g01686 120 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.7 2 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01686 Cca-Chr8 48596335 48596697 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g01686 2 115 Subtilisin-like Serine Gene Family AT3G14240 66.102 1.08e-44 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01686 - - gmx:100784180 185.267