Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01673 ATGCCGCAGGGCAATGCCGCCGCCGCCGCTCTGTTGGACCACGGTGGCGATGCCGGCGACGCCGTGATGGCGCGGTGGCTTCAGTCCGCCGGCTTGCAGCATCTCGCCTCTCCCCTCGCTTCCACCGCCATCGATCATCGACTCCTCCCCAACCTTCTCATGCAGGGTTATGGAGCGCAGTCTGCTGAAGAGAAGCAGAGGCTTTTAAAGTTAATGAGAAACCTCAATTTTAATGGGGAATCTGGTTCAGAGCCATATACACCCACTGCGTCAGATGGGTTTTATTCTCCGGAGTTTAGGGGGGATTTTGGGGCCGGGCTTTTGGATCTTCATGCTATGGATGATACGGAGCTTTTGTCTGAGCATGTAGTTTCAGAACCTTTTGAGCCATCGCCCTTCATGCCTGGAGATACTAGAGTATTTGAAGAGGATTTCAATCCTATTAACAGCAAGCTGGAAAGTGGGGAAGCAGATGTTGATGCATCAATTTCTTTACCTATGAATGAAAAAGAGTATAGCACGAGGGAAAATAATGTTGCCAAGATTAGAGTTGTGGTACGGAAAAGACCTTTAAACAAGAAGGAGCTTGCTAAAAAGGAAGATGATATTGTAACTGTATCTGACAGTGCGTATCTGACTGTCCATGAACCCAAACTAAAGGTTGATTTGACGGCTTATGTGGACAAGCATGAGTTTTGTTTTGATGCTGTGCTTGATGAGCACGTTACCAATAACGAAGTATACCGAAGTACCGTTGAACCAATTATTCCTACAATTTTTGAGCGAACCAAAGCTACCTGTTTTGCTTATGGTCAGACAGGAAGTGGGAAAACATACACAATGCAACCTTTACCACTCAGAGCTGCAGAAGACCTTGTACGACAGTTGCATCAGCCAGTTTACCGGAATCAAAGATTTAAATTGTGGCTTAGCTACTTTGAGATATATGGTGGAAAACTTTATGATCTTCTCAGTGACAGAAAGAAACTTTGTATGAGGGAAGATGGACGGCAGCAAGTTTGCATTGTAGGACTGCAAGAATTTGAAGTTTCTGATGTACAAATTGTCAAAGAATTCATTGAAAAGGGAAATGCTGCAAGAAGTACAGGATCCACTGGTGCTAATGAGGAGTCCTCCAGATCACATGCTATCTTACAACTGGTTGTAAAGAAGCACAGTGAAGTAAAAGAGAGCAAGCGGAACAATGATGGAAACGAGGCAAGAAGTGGGAAGGTTGTGGGAAAAATTTCCTTTATTGATCTTGCTGGAAGTGAACGAGGTGCTGACACTACTGATAATGATCGTCAGACACGGATTGAAGGAGCAGAAATCAATAAAAGCCTTTTGGCTTTGAAGGAGTGCATTCGTGCTTTAGACAATGACCAGATCCATATTCCATTTCGGGGAAGCAAACTTACAGAAGTGCTTCGTGACTCCTTTGTCGGTAATTCAAAGACTGTTATGATCTCTTGTATATCTCCAGGTGCTGGGTCTTGTGAACACACGCTTAATACCTTGAGATATGCAGATCGGGTTAAAAGTCTATCCAAAAGTGGGAATCCTAAAAAAGACCAAGTCCCAAATCCTGTACCACAAAGTAATAAGGAGGTTTCATCTACATCAACCCTTCCAGCTAGTGCTGGTGCAGAGGATTTTAATGATCAACGTCAAGAGAAAACAATGGATATGGGCAGGAAATTTCTTGAAAAGGAAAATTCTTTGCAAAGCTCTGCTGCTACTGTTGATAAACAGTTATTTGGTTTTTCTTCAAATTACCTATTAAATGGGCGAGAGGAAAAAGGTTTGGTTTCTGCTCCAATGGACAGGGAGAGGTTTGAAGTGAAGAACTCACACAGTGACTCTACCAGTCAAAAGATGAACTCTTATTCACTAAATGATACAGATGAAAAAGTGCAAAAGGTGTCTCCTCCACGCAGAAAAGGGTCCAAGGATGAAAAGTCTGAAAGGCCTGCAAACTGGATGAAGCGGGATTCTAGTGGTTCTGATCTCTTCACTACAAGCTCCAAGCAGCAAAGCACGGGGAATTATAGCACTGCGTCTAAGGATGAAAAGTCTGAAAGGCCTGCAAACTGGATGAAGAGGGATGCCAGTGGTTCTGATCTCGTCACTACAAGCTCCAAGCAGCAGAGCACAGGGAATTATAGCTCTGTGTCGAAAGATGAAAAGTCGGAAAGGCCTGCAAACTGGATGAAAAGGGACACCAATGGCTCTGATCTCTTCACTACAAGCTCCAAGCAGCAGAGCACAGGGAATTATAACAATATTACCTCTGGATCTAGGCTTTATGAAGCAGAATTCAATCCTGATAGGAATATCAGTGCAGTACTTGAGGAGGAAGAAGCACTAATTGCTGCTCATAGGAAAGAAATCGAGGATACGATGGAGATTGTTCGTGAAGAAATGAAACTGTTAGCAGAAGTGGACCAACCGGGAAGCCTTATTGACAACTACGTAACCCAACTGAGTTTTGTGCTTTCTCGCAAAGCAGCAAGTCTGGTGGGTCTTCAAGCTCGTCTAGCAAGATTCCAACATCGACTAAAAGAGCAGGAGATTCTTAGTAGAAAAAGAGTTCCCCGTCAGTAA 2604 0.4386 MPQGNAAAAALLDHGGDAGDAVMARWLQSAGLQHLASPLASTAIDHRLLPNLLMQGYGAQSAEEKQRLLKLMRNLNFNGESGSEPYTPTASDGFYSPEFRGDFGAGLLDLHAMDDTELLSEHVVSEPFEPSPFMPGDTRVFEEDFNPINSKLESGEADVDASISLPMNEKEYSTRENNVAKIRVVVRKRPLNKKELAKKEDDIVTVSDSAYLTVHEPKLKVDLTAYVDKHEFCFDAVLDEHVTNNEVYRSTVEPIIPTIFERTKATCFAYGQTGSGKTYTMQPLPLRAAEDLVRQLHQPVYRNQRFKLWLSYFEIYGGKLYDLLSDRKKLCMREDGRQQVCIVGLQEFEVSDVQIVKEFIEKGNAARSTGSTGANEESSRSHAILQLVVKKHSEVKESKRNNDGNEARSGKVVGKISFIDLAGSERGADTTDNDRQTRIEGAEINKSLLALKECIRALDNDQIHIPFRGSKLTEVLRDSFVGNSKTVMISCISPGAGSCEHTLNTLRYADRVKSLSKSGNPKKDQVPNPVPQSNKEVSSTSTLPASAGAEDFNDQRQEKTMDMGRKFLEKENSLQSSAATVDKQLFGFSSNYLLNGREEKGLVSAPMDRERFEVKNSHSDSTSQKMNSYSLNDTDEKVQKVSPPRRKGSKDEKSERPANWMKRDSSGSDLFTTSSKQQSTGNYSTASKDEKSERPANWMKRDASGSDLVTTSSKQQSTGNYSSVSKDEKSERPANWMKRDTNGSDLFTTSSKQQSTGNYNNITSGSRLYEAEFNPDRNISAVLEEEEALIAAHRKEIEDTMEIVREEMKLLAEVDQPGSLIDNYVTQLSFVLSRKAASLVGLQARLARFQHRLKEQEILSRKRVPRQ 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01673 867 MobiDBLite consensus disorder prediction 604 761 - -
Cca08g01673 867 Pfam Kinesin motor domain 187 514 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca08g01673 867 Coils Coil 783 814 - -
Cca08g01673 867 MobiDBLite consensus disorder prediction 519 548 - -
Cca08g01673 867 ProSitePatterns Kinesin motor domain signature. 414 425 IPR019821 GO:0003777|GO:0005524|GO:0007018
Cca08g01673 867 MobiDBLite consensus disorder prediction 604 618 - -
Cca08g01673 867 PANTHER KINESIN-RELATED PROTEIN 6 1 653 - -
Cca08g01673 867 PANTHER KINESIN-RELATED PROTEIN 6 725 866 - -
Cca08g01673 867 PANTHER KINESIN-RELATED PROTEIN 6 687 725 - -
Cca08g01673 867 PANTHER KINESIN-RELATED PROTEIN 6 651 685 - -
Cca08g01673 867 MobiDBLite consensus disorder prediction 619 637 - -
Cca08g01673 867 PANTHER KINESIN-LIKE PROTEIN 651 685 - -
Cca08g01673 867 PANTHER KINESIN-LIKE PROTEIN 725 866 - -
Cca08g01673 867 PANTHER KINESIN-LIKE PROTEIN 1 653 - -
Cca08g01673 867 PANTHER KINESIN-LIKE PROTEIN 687 725 - -
Cca08g01673 867 Coils Coil 839 859 - -
Cca08g01673 867 Gene3D Kinesin motor domain 159 518 IPR036961 -
Cca08g01673 867 MobiDBLite consensus disorder prediction 638 662 - -
Cca08g01673 867 MobiDBLite consensus disorder prediction 704 724 - -
Cca08g01673 867 PRINTS Kinesin heavy chain signature 262 283 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca08g01673 867 PRINTS Kinesin heavy chain signature 372 389 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca08g01673 867 PRINTS Kinesin heavy chain signature 415 433 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca08g01673 867 PRINTS Kinesin heavy chain signature 465 486 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca08g01673 867 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 174 515 IPR027417 -
Cca08g01673 867 MobiDBLite consensus disorder prediction 515 555 - -
Cca08g01673 867 MobiDBLite consensus disorder prediction 665 686 - -
Cca08g01673 867 MobiDBLite consensus disorder prediction 741 761 - -
Cca08g01673 867 SMART kinesin_4 179 521 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca08g01673 867 CDD KISc_KIF2_like 181 513 - -
Cca08g01673 867 ProSiteProfiles Kinesin motor domain profile. 181 515 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01673 Cca-Chr8 48445765 48454427 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g01673 167 515 Calmodulin-binding Proteins AT5G65930 34.072 3.80e-43 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01673 K10393 - gmx:100800014 1546.18