Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01668 ATGGAGGATTCGGGGGCGCAGAAGAGGAACCACCCAGAGTTCGCGTTAGCGTCGGTTTCCGAGCTGTCTTCGCCTCATTCTTCTGCTTCGCCGGGGGTTGCACTCTTCGCCGGTGACCGTATTCAAATTCGGAATGAATCTCACCGTCTCCTTCTCAATGCTTATATTCCAGCTATTCAGCTATTCAGATTAGGTCCTATTGAATCAGTTTGCATGGTGGAAGAGTCTGAGGATGGCAAACAGACATCATATTCCAGTGGAGTCGCTATACAGTTTAGAAATCAGCAAGAGAGTGCGGACTTAAATTGTGTATTAAACAAATGGAAGAAGGCACTAGATGTTCAAGGAGGAAGCTTGCCAAATGGAACTATTGCAATAACTTCTAAAAGCAAATTTGATGAAAAGATAGAGTCGTCTTCTGCAAAAATGTATTTTCATTATTATGGACAACTTTTGCATCAGCAAAATATGTTGCAGGACTATGTGAGGACAGGAACCTATTATGCTGCAGTTATGGAGAATCGTGCAGATTTCATTGGTCGTGTAGTAGTTGATGTTGGTGCTGGTAGTGGTATTTTGTCATTATTTGCTGCCCAGGCTGGTGCAAAACATGTTTATGCCGTGGAAGCATCTGAAATGGCAGAATATGCACGTAAACTTATAGCTGGGAACCCAATATTGGGTCAACGAATTACAGTTATTAAAGGCAAAGTTGAGGATGTTGAATTGCCAGAGAAAGCAGATATTCTGATCTCTGAGCCCATGGGCACCTTGTTAGTTAATGAAAGAATGCTGGAGTCTTATGTCATTGCCAGAGATAGGTTTCTCACCCCTAACGGGAAAATGTTTCCTACAGTGGGAAGGATTCACATGGCTCCTTTCAGTGATGAATATTTGTTTGTTGAAATTGCTAATAAGGCCCTGTTTTGGCAACAACAAAACTACTATGGTGTTGATTTGACGCCCTTACATGGGACCGCCTTTCAAGGATATTTTTCTCAGCCTGTGGTGGATGCTTTTGATCCAAGGTTGTTAATAGCTGCTCCAATGTTCCACGTGATAGACTTTACCAAAATCAAGGAAGAAGAGCTGTATGAAATTGACATTCCTCTCAGATTCATAGCCACTGTGGGTGCCAGACTACATGGGCTGGCATGTTGGTTTGATGTACTGTTCAATGGAAGTACTGCTCGAAGGTGGCTTACCACTGCTCCTGGTTCACCTACAACCCACTGGTATCAGTTACGCTGTGTTCTTACACAGCCAATATATGTCGTGGCAGGACAAGAAATTACTGGCAGGATGCACTTGATCGCCCACACTGCTCAAAGTTATACAATCTATCTAACATTGTCAGCTAAAATGTGGGGGCCTGGTGCTGAACAAGGAGAGATTCTTCAAACATCATACTGTAAACTTGATCTGAAAGAACCATACTATAGAATGTCTCAACCGCAAGCTTATCCATTGACTCAAGATCAGCAACCTCAATCTCTTTTACAGACACAGGTATTGAATTTACAATCAGATACCTATTTCTTTCCATTCTTATTTTGTGAGTTTAAATTCTATGGAGAAACTCGAAATAGGTGGGTTTCACACTTGATAAGTCTGTTAGTTGGAGTATGTGTTTGGATGAATCGAAAAAAGTGGGAAATTATGGTTATTACATGTTCGAAAAAGTTTGATGTTTGA 1695 0.4159 MEDSGAQKRNHPEFALASVSELSSPHSSASPGVALFAGDRIQIRNESHRLLLNAYIPAIQLFRLGPIESVCMVEESEDGKQTSYSSGVAIQFRNQQESADLNCVLNKWKKALDVQGGSLPNGTIAITSKSKFDEKIESSSAKMYFHYYGQLLHQQNMLQDYVRTGTYYAAVMENRADFIGRVVVDVGAGSGILSLFAAQAGAKHVYAVEASEMAEYARKLIAGNPILGQRITVIKGKVEDVELPEKADILISEPMGTLLVNERMLESYVIARDRFLTPNGKMFPTVGRIHMAPFSDEYLFVEIANKALFWQQQNYYGVDLTPLHGTAFQGYFSQPVVDAFDPRLLIAAPMFHVIDFTKIKEEELYEIDIPLRFIATVGARLHGLACWFDVLFNGSTARRWLTTAPGSPTTHWYQLRCVLTQPIYVVAGQEITGRMHLIAHTAQSYTIYLTLSAKMWGPGAEQGEILQTSYCKLDLKEPYYRMSQPQAYPLTQDQQPQSLLQTQVLNLQSDTYFFPFLFCEFKFYGETRNRWVSHLISLLVGVCVWMNRKKWEIMVITCSKKFDV 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01668 564 CDD AdoMet_MTases 183 286 - -
Cca08g01668 564 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 1 492 IPR025799 GO:0016274|GO:0018216
Cca08g01668 564 Gene3D - 286 494 - -
Cca08g01668 564 PANTHER HISTONE-ARGININE METHYLTRANSFERASE 1.4-RELATED 1 492 - -
Cca08g01668 564 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 137 452 IPR025799 GO:0016274|GO:0018216
Cca08g01668 564 Gene3D Vaccinia Virus protein VP39 124 284 IPR029063 -
Cca08g01668 564 Pfam Ribosomal protein L11 methyltransferase (PrmA) 180 252 - -
Cca08g01668 564 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 147 458 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01668 Cca-Chr8 48398437 48408737 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g01668 71 434 C2H2 Transcription Factor Family AT3G12270 30.848 4.85e-39 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01668 K05931 - gmx:100818828 907.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g01668 08 48398437 48408737 Cca08g01668 08 48398437 48408737 ECH
Cca11g02774 11 55103947 55115549 Cca08g01668 08 48398437 48408737 PCT