Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01642 ATGCGCGCTCACCCTCTGACTCAAACGCACACTCTCGAACGCTCGCACACTCTCAAACCTAAAACGCTCTATACAGTCGGAAAGTACCAGTTCACGTGCTTCCTTGGCCGCGAGAACTTCGCCATGGTCTACCAGGCACACTCGCTGCTCGACAGCGCCACGGTCGCGGTAAAAGCCATTGATAAGTCCAAGACGGTCGACGCCTCCATGGAGCCCCGCATCGTGCGCGAGATTGATGCCATGCGCCGCCTCCAGCACCACCTTAACATCCTCAAAATCCCCGAAGTCCTTGCCACCAAGACCAAGATCTACCTCATCGTGGACTTCGCCGGCGGCGGCGAGCTCTTCTCCAAGCTCTCCCGTAGCGGTCGCCTCTCGGAGTCCCTTGCGCGCCGCTACGCAGCTCGTCTCCACGCTCCGCTTCTGCCACCACCACGGTTATAA 444 0.5946 MRAHPLTQTHTLERSHTLKPKTLYTVGKYQFTCFLGRENFAMVYQAHSLLDSATVAVKAIDKSKTVDASMEPRIVREIDAMRRLQHHLNILKIPEVLATKTKIYLIVDFAGGGELFSKLSRSGRLSESLARRYAARLHAPLLPPPRL 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01642 147 SUPERFAMILY Protein kinase-like (PK-like) 26 136 IPR011009 -
Cca08g01642 147 ProSiteProfiles Protein kinase domain profile. 29 147 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca08g01642 147 SMART serkin_6 29 142 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca08g01642 147 PANTHER SERINE/THREONINE KINASE 20 138 - -
Cca08g01642 147 Gene3D Transferase(Phosphotransferase) domain 1 21 139 - -
Cca08g01642 147 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 20 138 - -
Cca08g01642 147 Pfam Protein kinase domain 34 137 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01642 Cca-Chr8 47919208 47919667 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g01642 26 141 CBL-interacting serine-threonine protein kinases AT4G14580 57.759 3.87e-39 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Cca08g01642 Pkinase 1.3e-16 CL0016