Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01641 ATGTCCTCGGGGTTGGACTTGCGGGGGCTGTTCGAAATGACGTTGGATAAGGGGAGGCGGTGGGAGAAACGGTTCACTTTCGATAAGAGTGTGGAGGCCGTCGAGACGAAGGTGAAGgaggttggcttgaatttggggtttagggttgaggttgGGAAGAACGGTGCAATTGGGTTGGGATGGGATACTATCTGTGCACAGAGGCTAGCTGAGCTGGGGTTTAAATATGGTGATATGCCAACCCACAATTTGCTATGGAGGGAATGTGAGAAATCATTAGACAATGTTGCTGCACGTTTGGCTGTGATCCCACTAGTCCAGGGCATAATTCTGTTGAAACTGAAGCAAATTGTAGGATAA 360 0.4389 MSSGLDLRGLFEMTLDKGRRWEKRFTFDKSVEAVETKVKEVGLNLGFRVEVGKNGAIGLGWDTICAQRLAELGFKYGDMPTHNLLWRECEKSLDNVAARLAVIPLVQGIILLKLKQIVG 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01641 119 Pfam Protein of unknown function (DUF455) 64 107 IPR007402 -
Cca08g01641 119 Gene3D Kinase associated domain 1, KA1 1 71 - -
Cca08g01641 119 Pfam NAF domain 1 50 IPR004041 GO:0007165
Cca08g01641 119 PANTHER SI:CH73-314G15.3 64 107 - -
Cca08g01641 119 PANTHER OS01G0214400 PROTEIN 64 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01641 Cca-Chr8 47918437 47919176 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g01641 1 60 CBL-interacting serine-threonine protein kinases AT4G14580 49.180 1.03e-06 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01641 - K12761 ccaj:114915371 183.341