Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01634 ATGTCCAACTCTTCCCTCCCATCTCTTCTTCTTTTGGTTCTTTTCATCATTTCAACCTCAGCCCAACCTTATGAAAACTATGATGATAAGCCAACCCTTTCCTCTAGAAGTGAGTCTGTCTACTCTCTCAAAGTCCCAACATTGGATGAAACCACCTTCGATAATCTCCTATCCTTTGGTTACTACCGTAAAAGCTGTCCCAAATTTGAATCCATTCTACACAACAAAGTGAAACAATGGATTCAAAAGGACTACACATTAGCAGCTAGTCTCTTGAGACTCCACTTCCATGATTGCTCTGTCAGGGGATGTGATGGGTCCATTCTGTTGAAGCATGATGGAAGTGAGAGGACAGCACAAGCTAGCAAGACACTAAGAGGGTTTGAAGTGGTGGATGATATCAAGGCAGAGTTAGAGAAAGAATGCCCCAAGACGGTGTCTTGTGCTGACATTCTCACGGCTGCTGCAAGGGATGCCACGGTTCAGTTAGGTGGGCCTTATTGGGCCGTTCCTTATGGTAGGAAAGATGGGAAGCTTTCAATTGCTAAGGAAGCTGAAATGGTGCCTATGGGCCATGAGAACATCACTTCCTTGATTGAGTTTTACCAATCCAGGGGTTTGACTGTGCTTGACTTGGTTGTTCTCTCAGGGGCTCATACAATTGGAAGGACTTCATGTGGCTCCATTCAATATAGGCTATACAACTACCAAGGAACTGGAAAACCAGACCCAACCCTAGATCCCAAATATGTTAACTTTTTGCAAAGAAAGTGCAGATGGGCCTCAGAGTATGTGGATCTTGATGCTACAACACCAAAGACCTTTGACAATGTGTACTATATTAATCTAAAGAAGAAAATGGGGTTGTTATCAACTGATCAATTGTTATATTCTGATCAAAGAACTTCTCCTCTTGTTTCTGCATTGGCCTCGTCGCGCACTATCTTTGAGCACCAATTTGCGGTGGCGATGGGAAAGCTTGGCATTGTTGATGTTCTCACGGACCAAGATGAAGGAGAAATCAGGACCAACTGCAATTTTGTCAATGCTTATTGA 1056 0.4347 MSNSSLPSLLLLVLFIISTSAQPYENYDDKPTLSSRSESVYSLKVPTLDETTFDNLLSFGYYRKSCPKFESILHNKVKQWIQKDYTLAASLLRLHFHDCSVRGCDGSILLKHDGSERTAQASKTLRGFEVVDDIKAELEKECPKTVSCADILTAAARDATVQLGGPYWAVPYGRKDGKLSIAKEAEMVPMGHENITSLIEFYQSRGLTVLDLVVLSGAHTIGRTSCGSIQYRLYNYQGTGKPDPTLDPKYVNFLQRKCRWASEYVDLDATTPKTFDNVYYINLKKKMGLLSTDQLLYSDQRTSPLVSALASSRTIFEHQFAVAMGKLGIVDVLTDQDEGEIRTNCNFVNAY 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01634 351 ProSiteProfiles Plant heme peroxidase family profile. 56 349 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca08g01634 351 Pfam Peroxidase 75 312 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca08g01634 351 PRINTS Plant peroxidase signature 66 85 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca08g01634 351 PRINTS Plant peroxidase signature 90 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca08g01634 351 PRINTS Plant peroxidase signature 126 139 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca08g01634 351 PRINTS Plant peroxidase signature 145 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca08g01634 351 PRINTS Plant peroxidase signature 164 179 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca08g01634 351 PRINTS Plant peroxidase signature 210 222 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca08g01634 351 PRINTS Plant peroxidase signature 266 281 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca08g01634 351 PRINTS Plant peroxidase signature 282 299 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca08g01634 351 PRINTS Plant peroxidase signature 322 335 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca08g01634 351 ProSitePatterns Peroxidases active site signature. 88 99 IPR019794 GO:0004601
Cca08g01634 351 CDD secretory_peroxidase 57 348 IPR033905 GO:0004601|GO:0042744
Cca08g01634 351 ProSitePatterns Peroxidases proximal heme-ligand signature. 211 221 IPR019793 -
Cca08g01634 351 Gene3D Peroxidase, domain 2 189 327 - -
Cca08g01634 351 PANTHER PEROXIDASE 49 348 - -
Cca08g01634 351 PANTHER PEROXIDASE 25-RELATED 49 348 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca08g01634 351 Gene3D - 60 349 - -
Cca08g01634 351 SUPERFAMILY Heme-dependent peroxidases 57 349 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cca08g01634 351 PRINTS Haem peroxidase superfamily signature 88 102 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca08g01634 351 PRINTS Haem peroxidase superfamily signature 146 163 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca08g01634 351 PRINTS Haem peroxidase superfamily signature 164 176 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca08g01634 351 PRINTS Haem peroxidase superfamily signature 211 226 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca08g01634 351 PRINTS Haem peroxidase superfamily signature 268 283 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01634 Cca-Chr8 47785170 47787803 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g01634 53 350 Peroxidase AT1G30870 60.333 8.21e-131 376
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01634 K00430 - gmx:100798229 631.328