Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01628 ATGAAATCCAACGATGCTCTGCGACACCTTACTGAAATGGCACTCTTCTTGTTCTACACTTTTCTTTCCCTCGCTTTCATCTTCACTCTTCTTAAGATTTTGCTCCAAACCCAATCAAGAAGATTCAGAAACCTTCCACCGGGTCCGCCAACCCTCCCCATCATCGGAAACCTCCACCACCTCAAGCCGCCAAATCACCACGCCTTCGCCGTGCTATCTCAAACCTACGGCGACGTCATCTCCCTCAGGTTCGGGCGGCGCCTCGTGGTGGTGCTGTCGTCGCTCTCCGTCGTGCAACAATGTTTCGCCGCGAACGATGTTGTCCTTGCGAACCGTCCTCGCTTCCTCGTCGGGAAGTACGTCTCCTACGACTACACCACCCTCGGTTCTACCTCGTACGGCCACCACTGGCGAAACCTCCGCCGCATCGCCACCGTGGACGTCCTCTCCACTCATCGCCTCAACTCGTTTGTCGGAGTTCGGAGGGACGAGATTAGGCGGCTGGTTATGAAGCTGGGACAGGACGCCACGTGTCGCGAGGGCGAGGGGTTTGCGAAGGTGGAACTCAGGTGGAGGCTGACGGAGATGACGTTCAACAACATGATGAGGATGATAACGGGGAGGAGGTGTTACGGTCAGGACTGTGACGTAAAGGAGGCTGAGACGGCGAGGCAGTTTAGAGAGGTCATAACGGAGATGGTGTCACTTTCAGGGGCCAACAACAAGGGTGACTTCTTACCTCTACTCAGGTTGTTTGATTTTGATGATTTGGAGAAGAGGCTGAAGAGGATTGCGAAGAGAGCTGATGCGTTCTTGCAGAGTCTGATTGAGGAGCATCGCAGTGGGAAGCACGGGAATGCTGACACCATGATTGATCATCTCTTGAAACTGGGAGAGTCGCAGCCTGAGTACTATTCGGATCATATGATCAAAGGTCTTATCCAGGCTATGCTTCTTGCTGGAACAGATACATCAGCTGTGACCATAGAGTGGGTGATGTCTGAATTATTGAACAACCCCGAAGTATTAAAGAAAGCAAAGGATGAAATAGACACACAAATTGGAAAGGACCGATTGGTAGAAGAACAAGATCTATCAAAACTTCCATACCTTCAAAACATAATTTCCGAGACACTTCGATTGCATCCTCCAGCTCCATTACTATTGCCACATGAATCTTCAGAGGATTGTACCATTGGAGGATACCATATTCCACGAAACACTATAGTCTTGACTAATGCGTGGCTCATTCATAGTGATCCTAAACTTTGGAGTGACCCCATGAGCTTTATGCCCGAGAGATTTGAAAAAGAAGGGGAAGTGAACAAGTTAATTACATTTGGGCTAGGGCGTAGGGCTTGCCCCGGATTGGGCCTGGCCCAACGTACGGTGGGCTTCACAATGGCACTATTGATCCAATGCTTCGAATGGGAACGAGAAAGTGAGGAAAAACTTGACATGATGGAGGACAAAGGGATTACCATGCCGAAGCTAATTCCGTTACAAGCCATGGCCAAATCACGACCTATCGTCAATGACGTCATGAAGTAA 1551 0.4984 MKSNDALRHLTEMALFLFYTFLSLAFIFTLLKILLQTQSRRFRNLPPGPPTLPIIGNLHHLKPPNHHAFAVLSQTYGDVISLRFGRRLVVVLSSLSVVQQCFAANDVVLANRPRFLVGKYVSYDYTTLGSTSYGHHWRNLRRIATVDVLSTHRLNSFVGVRRDEIRRLVMKLGQDATCREGEGFAKVELRWRLTEMTFNNMMRMITGRRCYGQDCDVKEAETARQFREVITEMVSLSGANNKGDFLPLLRLFDFDDLEKRLKRIAKRADAFLQSLIEEHRSGKHGNADTMIDHLLKLGESQPEYYSDHMIKGLIQAMLLAGTDTSAVTIEWVMSELLNNPEVLKKAKDEIDTQIGKDRLVEEQDLSKLPYLQNIISETLRLHPPAPLLLPHESSEDCTIGGYHIPRNTIVLTNAWLIHSDPKLWSDPMSFMPERFEKEGEVNKLITFGLGRRACPGLGLAQRTVGFTMALLIQCFEWERESEEKLDMMEDKGITMPKLIPLQAMAKSRPIVNDVMK 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01628 516 Gene3D Cytochrome P450 31 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g01628 516 SUPERFAMILY Cytochrome P450 46 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g01628 516 Pfam Cytochrome P450 46 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g01628 516 PRINTS P450 superfamily signature 445 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g01628 516 PRINTS P450 superfamily signature 454 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g01628 516 PRINTS P450 superfamily signature 373 384 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g01628 516 PRINTS P450 superfamily signature 320 337 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g01628 516 PANTHER ISOFLAVONE 2'-HYDROXYLASE 15 514 - -
Cca08g01628 516 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 15 514 - -
Cca08g01628 516 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 447 456 IPR017972 GO:0005506|GO:0016705
Cca08g01628 516 PRINTS E-class P450 group I signature 329 355 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g01628 516 PRINTS E-class P450 group I signature 413 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g01628 516 PRINTS E-class P450 group I signature 309 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g01628 516 PRINTS E-class P450 group I signature 444 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g01628 516 PRINTS E-class P450 group I signature 372 390 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g01628 516 PRINTS E-class P450 group I signature 73 92 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g01628 516 PRINTS E-class P450 group I signature 454 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01628 Cca-Chr8 47466857 47501912 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g01628 22 511 Cytochrome P450 AT4G37370 54.858 0.0 557
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01628 K13260 - ccaj:109806032 919.072