Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01612 ATGGATGAAACTGAGTCTCACAGTCCCTTAGGCTCACCCACGATTAGCCCTACGACGACAAGCAAGCCTTGTAGCCCTGCAGAACATGGCATGAACTTGATGGTTGTATTGGCAGCCATAGTGTGTGCCTTCCTCTGTGCCCTTGGTCTCAACACAATGCTACAATGTGTGTTCCAATGTGCCAATCGCGTCCTCACGGAGCCCCTTCAGTGGATTGCCTCACGCAGGATCAATTCTGGCCTAAAGAAGAAAGAAATGGTGGCTTTGCCAACCCAAACTTATACCAATTCTGGCTCTCCATCTTCACCTTCTAATTGTGCCATTTGCTTAGTAGAGTTCTCTGATGGGGACAAGATAAGGAACTTCGTTAAGCCCACTGATTCGGATCACTCCTTGCATGTTCTTGTATCCTAG 414 0.4807 MDETESHSPLGSPTISPTTTSKPCSPAEHGMNLMVVLAAIVCAFLCALGLNTMLQCVFQCANRVLTEPLQWIASRRINSGLKKKEMVALPTQTYTNSGSPSSPSNCAICLVEFSDGDKIRNFVKPTDSDHSLHVLVS 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01612 137 MobiDBLite consensus disorder prediction 7 23 - -
Cca08g01612 137 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 19 134 - -
Cca08g01612 137 PANTHER OS06G0666500 PROTEIN 19 134 - -
Cca08g01612 137 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01612 Cca-Chr8 47253752 47254249 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g01612 32 134 C3H Transcription Factor Family AT3G10910 33.333 4.88e-14 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01612 - K19040 gmx:100803003 191.43