Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01602 ATGGTGAGAGACATGATGGGCACATACTCATCATCAGGAGACATGAATGAGAAACCTGCATGGCTAGAGAGGTTGATGGCTGAGACATTCTTTGGTGGTTGTGGGGTCCACGAGGATCGCAGGAAGAACGAGAAGAACGTCTTTTGCTTGCACTGTTGCCTTAGCATCTGCCCCCACTGCCTCTCTTCTCACCGTTCTCACCCTCTCCTCCAGGTGCGAAGGTATGTTTACCACGACGTGATTCGATTAGATGATCTGGAAAAACTCATTGATTGTTCCAATATTCAGCCCTATACTATAAACAGCGCCAAGGTAATATTCTTAAATCAGAGGCCACAATCAAGGACATGCAAAGGTCCTGCCAACGCTTGCTTCACTTGTGACAGGATTCTTCAGGAGCCATTTCATTTCTGCTCTCTATCATGCAAGGTGGATTACATGGTGTATGGGGGTCAAAGCTTGTCGAGCATTTTGCATCGATTTGATGAATCTGATTTTGCAATTTCGCAATTCGAGGGCCTAAGAGTGGATGGGTCAGAGGTAACCGATGAAGATACCCAAATTGCCCCTAGCTCTTCTTACTCCAACACTGAGGCCACCAGCAATTCGGTAATTTCACGTGAACCAAATAGCAGCGTGAAGAAGGGCAAGACCAATAGGTTCCTCCCTGGTATCGTCCTATCTCTTGGCAGCAGAAGAAAGGGTGCCCCTCACAGGGCTCCTCTCTCCTAG 732 0.4768 MVRDMMGTYSSSGDMNEKPAWLERLMAETFFGGCGVHEDRRKNEKNVFCLHCCLSICPHCLSSHRSHPLLQVRRYVYHDVIRLDDLEKLIDCSNIQPYTINSAKVIFLNQRPQSRTCKGPANACFTCDRILQEPFHFCSLSCKVDYMVYGGQSLSSILHRFDESDFAISQFEGLRVDGSEVTDEDTQIAPSSSYSNTEATSNSVISREPNSSVKKGKTNRFLPGIVLSLGSRRKGAPHRAPLS 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01602 243 MobiDBLite consensus disorder prediction 179 217 - -
Cca08g01602 243 PANTHER - 19 243 - -
Cca08g01602 243 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 19 243 - -
Cca08g01602 243 MobiDBLite consensus disorder prediction 184 217 - -
Cca08g01602 243 Pfam PLATZ transcription factor 73 144 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01602 Cca-Chr8 47089212 47096017 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Cca08g01602 PLATZ 1.3e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01602 - - ccaj:109804478 504.597