Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01597 ATGGCTTCAACTGGGTTTGATGAAGATGGTGATAACAGAGTCGGTATTTGGGATTTGGATAAGAAGATTGACCAGCCAATGGATGAAGAAGGTGAAAGGCTCAAAAATATGTTCAGAGAAAAAAAGCTTTCTACACTGTTGCTTTTGCGGCTTGCATATCAGAGTCTTGGTGTAGTTTATGGAGATTTGGGCACTTCCCCCTTGTACGTTTTCTATAACACGTTTCCTCACCGAGTTAAAGAGCAGGAGGATGTGATCGGAGCTCTTTCTTTGATTATATACTCTCTTACGCTGGTGCCACTGCTCAAATATGTTGTCATTGTATTAAGAGCAAATGACAATGGTCAAGGTGGAACATTGGCTCTTTATTCCTTGCTCTGTCGACATGCAAACATTAAAACCATTCCCAATCAGCATCATACAGATGAACATCTAACAACATATAGTCGATCAACCTTCCATGAGAAGTCATTTGCTGCTAAAACCAAGAGATGGTTAGAGGAGCAAGCTTATATTAAAAATGTCATTCTTATTCTTGCACTTGTTGGTACCTGCATGGTGATTGGAGATGGTATTCTTACACCAGCTATATCTGTTTTATCTGCTGTTGGCGGCATCAAGGTTAATCATGCTGATTTGAGTAACGGAGTAGTTGTGCTGGTTGCTGTTGTAATATTAATTGGGTTATTCAGCATGCAACATTATGGCACAGATAGAGTTGGTTGGCTCTTTGCTCCAATTGTACTTCTTTGGTTTCTCCTAATTGGAGGTATAGGTATATTCAACATCTGTAAATATGGCAGCAGCGTTCTGAAAGCTTTTTCACCTGTGTACATATACCGGTATCTAAAACGAGGAGGTAAAGAAGGTTGGACTTCCCTTGGTGGAATTTTGCTCAGCATAACAGGGACAGAGGCTCTTTTTGCGGACCTAGCACACTTTCCAGTCTCTTCTGTACAGCTTGCATTTACTCTGTTAGTGTTTCCTTGCCTTCTTTTAGCATACTCTGGACAGGCTGCTTACCTTATGCATAACTTGGAGCATTCAAGTGATGCCTTTTATCGTTCTATTCCAGACAAAATATACTGGCCAGTATTTGTTGTTGCGACAGCAGCAGCTATAGTTGCAAGCCAGGCCACAATATCCGCAACCTTCTCAATCATTAAGCAGGCCAATGCTCATGGCTGTTTCCCAAGAATAAAAGTTGTACATACATCAAGGAAGTTCCTTGGCCAGATATACATTCCAGATATCAATTGGATCCTTATGATTCTATGCATTGCTGTTACTGCTGGGTTTAAAAACCAAAGTCAGATTGGAAATGCATATGGTACTGCTGTTGTGCTAGTTATGTTGGTTACAACATTGCTTATGATTTTAATCATGATATTAGTGTGGCGCTGCCATTGGATTCTGGTGGTGGTGTTCACTGGCTTATCACTGATTGTGGAATGCACATACTTCTCTGCTGTACTCTTCAAAGTTGATCAAGGTGGATGGGCTCCTCTTGCAATTGCTGGAGCATTTCTTGTAATTATGTATGTTTGGCATTATGGCACAGTGAAACGCTATGAGTTTGAAATGCATAGTAAGGTCTCAATGGCATGGATTCTTGGGCTAGGACCAAGTTTAGGACTTGTTCGTGTCCCGGGAATTGGATTAGTATACACAGAGCTTGCAAGTGGAGTACCACACATCTTTTCTCACTTCATCACAAACCTACCAGCCATCCATTCTGTTGTTGTATTTGTGTGTGTGAAGTATCTTCCTGTCTACACTGTCCCAGAAGATGAGAGGTTCCTTGTGAAGCGGATTGGACCTAAGAACTTCCACATGTTTCGATGCGTGGCGCGATATGGATACAAAGATTTGCACAAGAAAGATGATGATTTTGAGAAGAAACTTTTTCATAGCCTCTTTGTGTTTGTTAAGCTTGAGTCTATGATGGAGAGTTGCTCAGACTCAGATGACTATAGTTTATATGAAGAGGAAAATGAGCACTCAAGAGTAGGCCTATTGAACAATAATGTGAACACAGCTTCATTGAATATGGATCCAACAGTTTCATCAGCAGATTCAATAGTATCAGTTACATCTCCATCACACATGAATGCTGTTACCACTATTCAATCATATGGCCATGTTAGCAGCCACACTGAGGTGGATGAAGTTGAGTTTTTGAACAACTGTAGGGATGCTGGGGTGGTTCACATACTAGGAAACACAGTTGTCAGGGCCAGGAGGGATTCAAGATTCTACAATAAGATAGCTGTTGATTATATATATGCATTTCTTAGGAAAATATGCAGGGAACATAGTGTGATCTTCAACGTTCCTCATGAGAGTCTCTTAAATGTTGGTCAGGTTTTCTATGTATAG 2379 0.4069 MASTGFDEDGDNRVGIWDLDKKIDQPMDEEGERLKNMFREKKLSTLLLLRLAYQSLGVVYGDLGTSPLYVFYNTFPHRVKEQEDVIGALSLIIYSLTLVPLLKYVVIVLRANDNGQGGTLALYSLLCRHANIKTIPNQHHTDEHLTTYSRSTFHEKSFAAKTKRWLEEQAYIKNVILILALVGTCMVIGDGILTPAISVLSAVGGIKVNHADLSNGVVVLVAVVILIGLFSMQHYGTDRVGWLFAPIVLLWFLLIGGIGIFNICKYGSSVLKAFSPVYIYRYLKRGGKEGWTSLGGILLSITGTEALFADLAHFPVSSVQLAFTLLVFPCLLLAYSGQAAYLMHNLEHSSDAFYRSIPDKIYWPVFVVATAAAIVASQATISATFSIIKQANAHGCFPRIKVVHTSRKFLGQIYIPDINWILMILCIAVTAGFKNQSQIGNAYGTAVVLVMLVTTLLMILIMILVWRCHWILVVVFTGLSLIVECTYFSAVLFKVDQGGWAPLAIAGAFLVIMYVWHYGTVKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEDERFLVKRIGPKNFHMFRCVARYGYKDLHKKDDDFEKKLFHSLFVFVKLESMMESCSDSDDYSLYEEENEHSRVGLLNNNVNTASLNMDPTVSSADSIVSVTSPSHMNAVTTIQSYGHVSSHTEVDEVEFLNNCRDAGVVHILGNTVVRARRDSRFYNKIAVDYIYAFLRKICREHSVIFNVPHESLLNVGQVFYV 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01597 792 Pfam K+ potassium transporter 53 623 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cca08g01597 792 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 6 791 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cca08g01597 792 PANTHER POTASSIUM TRANSPORTER 6 791 - -
Cca08g01597 792 TIGRFAM kup: potassium uptake protein 51 792 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01597 Cca-Chr8 47043470 47056043 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g01597 7 792 Inorganic Solute Cotransporters AT2G35060 76.269 0.0 1204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01597 K03549 - gmx:100801093 1407.89