LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cca08g01597	ATGGCTTCAACTGGGTTTGATGAAGATGGTGATAACAGAGTCGGTATTTGGGATTTGGATAAGAAGATTGACCAGCCAATGGATGAAGAAGGTGAAAGGCTCAAAAATATGTTCAGAGAAAAAAAGCTTTCTACACTGTTGCTTTTGCGGCTTGCATATCAGAGTCTTGGTGTAGTTTATGGAGATTTGGGCACTTCCCCCTTGTACGTTTTCTATAACACGTTTCCTCACCGAGTTAAAGAGCAGGAGGATGTGATCGGAGCTCTTTCTTTGATTATATACTCTCTTACGCTGGTGCCACTGCTCAAATATGTTGTCATTGTATTAAGAGCAAATGACAATGGTCAAGGTGGAACATTGGCTCTTTATTCCTTGCTCTGTCGACATGCAAACATTAAAACCATTCCCAATCAGCATCATACAGATGAACATCTAACAACATATAGTCGATCAACCTTCCATGAGAAGTCATTTGCTGCTAAAACCAAGAGATGGTTAGAGGAGCAAGCTTATATTAAAAATGTCATTCTTATTCTTGCACTTGTTGGTACCTGCATGGTGATTGGAGATGGTATTCTTACACCAGCTATATCTGTTTTATCTGCTGTTGGCGGCATCAAGGTTAATCATGCTGATTTGAGTAACGGAGTAGTTGTGCTGGTTGCTGTTGTAATATTAATTGGGTTATTCAGCATGCAACATTATGGCACAGATAGAGTTGGTTGGCTCTTTGCTCCAATTGTACTTCTTTGGTTTCTCCTAATTGGAGGTATAGGTATATTCAACATCTGTAAATATGGCAGCAGCGTTCTGAAAGCTTTTTCACCTGTGTACATATACCGGTATCTAAAACGAGGAGGTAAAGAAGGTTGGACTTCCCTTGGTGGAATTTTGCTCAGCATAACAGGGACAGAGGCTCTTTTTGCGGACCTAGCACACTTTCCAGTCTCTTCTGTACAGCTTGCATTTACTCTGTTAGTGTTTCCTTGCCTTCTTTTAGCATACTCTGGACAGGCTGCTTACCTTATGCATAACTTGGAGCATTCAAGTGATGCCTTTTATCGTTCTATTCCAGACAAAATATACTGGCCAGTATTTGTTGTTGCGACAGCAGCAGCTATAGTTGCAAGCCAGGCCACAATATCCGCAACCTTCTCAATCATTAAGCAGGCCAATGCTCATGGCTGTTTCCCAAGAATAAAAGTTGTACATACATCAAGGAAGTTCCTTGGCCAGATATACATTCCAGATATCAATTGGATCCTTATGATTCTATGCATTGCTGTTACTGCTGGGTTTAAAAACCAAAGTCAGATTGGAAATGCATATGGTACTGCTGTTGTGCTAGTTATGTTGGTTACAACATTGCTTATGATTTTAATCATGATATTAGTGTGGCGCTGCCATTGGATTCTGGTGGTGGTGTTCACTGGCTTATCACTGATTGTGGAATGCACATACTTCTCTGCTGTACTCTTCAAAGTTGATCAAGGTGGATGGGCTCCTCTTGCAATTGCTGGAGCATTTCTTGTAATTATGTATGTTTGGCATTATGGCACAGTGAAACGCTATGAGTTTGAAATGCATAGTAAGGTCTCAATGGCATGGATTCTTGGGCTAGGACCAAGTTTAGGACTTGTTCGTGTCCCGGGAATTGGATTAGTATACACAGAGCTTGCAAGTGGAGTACCACACATCTTTTCTCACTTCATCACAAACCTACCAGCCATCCATTCTGTTGTTGTATTTGTGTGTGTGAAGTATCTTCCTGTCTACACTGTCCCAGAAGATGAGAGGTTCCTTGTGAAGCGGATTGGACCTAAGAACTTCCACATGTTTCGATGCGTGGCGCGATATGGATACAAAGATTTGCACAAGAAAGATGATGATTTTGAGAAGAAACTTTTTCATAGCCTCTTTGTGTTTGTTAAGCTTGAGTCTATGATGGAGAGTTGCTCAGACTCAGATGACTATAGTTTATATGAAGAGGAAAATGAGCACTCAAGAGTAGGCCTATTGAACAATAATGTGAACACAGCTTCATTGAATATGGATCCAACAGTTTCATCAGCAGATTCAATAGTATCAGTTACATCTCCATCACACATGAATGCTGTTACCACTATTCAATCATATGGCCATGTTAGCAGCCACACTGAGGTGGATGAAGTTGAGTTTTTGAACAACTGTAGGGATGCTGGGGTGGTTCACATACTAGGAAACACAGTTGTCAGGGCCAGGAGGGATTCAAGATTCTACAATAAGATAGCTGTTGATTATATATATGCATTTCTTAGGAAAATATGCAGGGAACATAGTGTGATCTTCAACGTTCCTCATGAGAGTCTCTTAAATGTTGGTCAGGTTTTCTATGTATAG	2379	0.4069	MASTGFDEDGDNRVGIWDLDKKIDQPMDEEGERLKNMFREKKLSTLLLLRLAYQSLGVVYGDLGTSPLYVFYNTFPHRVKEQEDVIGALSLIIYSLTLVPLLKYVVIVLRANDNGQGGTLALYSLLCRHANIKTIPNQHHTDEHLTTYSRSTFHEKSFAAKTKRWLEEQAYIKNVILILALVGTCMVIGDGILTPAISVLSAVGGIKVNHADLSNGVVVLVAVVILIGLFSMQHYGTDRVGWLFAPIVLLWFLLIGGIGIFNICKYGSSVLKAFSPVYIYRYLKRGGKEGWTSLGGILLSITGTEALFADLAHFPVSSVQLAFTLLVFPCLLLAYSGQAAYLMHNLEHSSDAFYRSIPDKIYWPVFVVATAAAIVASQATISATFSIIKQANAHGCFPRIKVVHTSRKFLGQIYIPDINWILMILCIAVTAGFKNQSQIGNAYGTAVVLVMLVTTLLMILIMILVWRCHWILVVVFTGLSLIVECTYFSAVLFKVDQGGWAPLAIAGAFLVIMYVWHYGTVKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEDERFLVKRIGPKNFHMFRCVARYGYKDLHKKDDDFEKKLFHSLFVFVKLESMMESCSDSDDYSLYEEENEHSRVGLLNNNVNTASLNMDPTVSSADSIVSVTSPSHMNAVTTIQSYGHVSSHTEVDEVEFLNNCRDAGVVHILGNTVVRARRDSRFYNKIAVDYIYAFLRKICREHSVIFNVPHESLLNVGQVFYV	792

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cca08g01597	792	Pfam	K+ potassium transporter	53	623	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Cca08g01597	792	PANTHER	OSMOTIC STRESS POTASSIUM TRANSPORTER	6	791	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Cca08g01597	792	PANTHER	POTASSIUM TRANSPORTER	6	791	-	-
	Cca08g01597	792	TIGRFAM	kup: potassium uptake protein	51	792	IPR003855	GO:0015079\|GO:0016020\|GO:0071805

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Cca08g01597	Cca-Chr8	47043470	47056043	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Cca08g01597	7	792	Inorganic Solute Cotransporters	AT2G35060	76.269	0.0	1204

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cca08g01597	K03549		-	gmx:100801093	1407.89

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