Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01590 ATGTCTGATTTTCAGGTGGGTATGGAGTTTTGGGCTAGATGGGCTCATGAGGCTCTCTGGCATGCTTCCTTGTGGCACATGCATGAGTCCCACCATCGACCAAGAGAAGGACCCTTTGAGCTTAACGATGTATTCGCAATAATCAATGCTATCCCTGCCATCGCTCTCCTTGCCTATGGTTTCTTTCATAAGGGATTGGTCCCTGGCCTCTGCTTCAGTACGTGGTTGATTGATCATCCAAATTTTTTGTCAAATCAAGTTTACATTGGTGGCGATTCATACTCTGGTATTCCTATTCCAGTGATTGTTCAAGAAATTTCACAAGGTAAAAAAACCCGTATATGA 345 0.4377 MSDFQVGMEFWARWAHEALWHASLWHMHESHHRPREGPFELNDVFAIINAIPAIALLAYGFFHKGLVPGLCFSTWLIDHPNFLSNQVYIGGDSYSGIPIPVIVQEISQGKKTRI 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01590 114 SUPERFAMILY alpha/beta-Hydrolases 73 111 IPR029058 -
Cca08g01590 114 Pfam Serine carboxypeptidase 72 112 IPR001563 GO:0004185|GO:0006508
Cca08g01590 114 PANTHER BETA-CAROTENE 3-HYDROXYLASE 1, CHLOROPLASTIC 6 74 IPR045019 GO:0016491
Cca08g01590 114 Gene3D alpha/beta hydrolase 53 114 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01590 Cca-Chr8 46716107 46717168 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g01590 6 72 Chloroplast and Mitochondria Gene Families AT4G25700 88.060 1.03e-41 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01590 K15746 - pvy:116107134 147.517