Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01563 ATGGTTGTTGTGACAGGAGCTGTGATGGCTATGGTGGTTGGTGATAGGTGTAAGGAAGATTTGGGAATTTGCCAAGCCAAAGATGCTTGTAACTCAAAGTGCTCTAAAATTCATCAAGGTGGACATGGGATTTGCGAACCCAATGGGGCAATGAATCATTGTTTGTGTTACTATGATTGCGAAATATGTGAAAAAGGTTTGGGTGTTTTAGGAAGCTGCAATGAAACTCAATGCAATTCTGATTGTGCTTCCAAGTACCCAGGCAAAGGAGCAACTGGATATTGTTTCAGCATAGTTGAGACTCCTTATAATAATTGTTATTGTTGTTACTATTGTTCATAA 342 0.3918 MVVVTGAVMAMVVGDRCKEDLGICQAKDACNSKCSKIHQGGHGICEPNGAMNHCLCYYDCEICEKGLGVLGSCNETQCNSDCASKYPGKGATGYCFSIVETPYNNCYCCYYCS 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01563 113 Gene3D - 15 60 IPR036574 -
Cca08g01563 113 Pfam S locus-related glycoprotein 1 binding pollen coat protein (SLR1-BP) 17 60 IPR010851 -
Cca08g01563 113 PANTHER DEFENSIN-LIKE PROTEIN 183 2 112 IPR039641 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g01563 1 112 Plant Defensins Gene Families AT5G38330 30.769 2.42e-07 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01563 - K14352 gmx:102668462 126.331