Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01530 ATGCGCCGCACAAAGCAGCTGTTAGCAAAGGAAGTGAAAAGAGCAGCACATGGGTTGAGAGACTCCCTTCTGTGGGTAGTTGTGAAAAGCAACAAGCATGTGAGGCCATGTGCCATTCAAAATAGACCACTCCCACCACTAGTGTACCTACGTTTGGATTTGATGGAGGGTCAACCTGCTAAACGAAGACGTGTATACTCACTTGAACCCAACAAAGTGGAACAAGCAGTGTTTGCTAGGAACTACATGAACTACTTGGTTCCAGCATTGATGAAGATCAAGGAAAGAAGCTCTTCACAACACAGTGGCCATTGTGATGATATTCAGAATGTTGTTAAGTACGAGGTGGACATGGCAATGGTGTACTCAGCCCAAGGTTATGCATGGAGCAATGCTCTAAGTGTGAAGCTTCAAAGGGATAGGGCCAATGTAGATAGTGATGACACTAAGGCTGGTGAAGGCTCATCAAAAATTTGTGGCCAAAATTGTGATGAAATGGTGCCATTGAATCATTTCCCTTCAAACCCTAGTTTGAAGTCTAGTAATAAGCGCAAGGACATGCTAGAAATCAAAAAGGGTTTAAGAGAAGATGGTGATGAAGAAAATGATGAAGTCATCAATGGCCAGTTGAAGAGCCTAAGAAGGTTGATACCAGGGGGAGAAGAGATGTGTAGTGAACAAATGGTGACAGAGCTACAAAGCTATGTGGAGAAGGGAACAAATTGTGCAAAAGAAAAGCTAGAAGGAAGTAACAATATTATACTCTCCAATTGA 774 0.4276 MRRTKQLLAKEVKRAAHGLRDSLLWVVVKSNKHVRPCAIQNRPLPPLVYLRLDLMEGQPAKRRRVYSLEPNKVEQAVFARNYMNYLVPALMKIKERSSSQHSGHCDDIQNVVKYEVDMAMVYSAQGYAWSNALSVKLQRDRANVDSDDTKAGEGSSKICGQNCDEMVPLNHFPSNPSLKSSNKRKDMLEIKKGLREDGDEENDEVINGQLKSLRRLIPGGEEMCSEQMVTELQSYVEKGTNCAKEKLEGSNNIILSN 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01530 257 PANTHER TRANSCRIPTION FACTOR BHLH146 56 237 - -
Cca08g01530 257 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 56 237 IPR044660 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01530 Cca-Chr8 45233522 45238866 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g01530 61 137 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30180 46.753 9.39e-15 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01530 - - gmx:100805301 301.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g02411 11 50988540 50989578 Cca08g01530 08 45233522 45238866 PCT