Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01515 ATGTTGAATCACATCTCACTCTATTATCTTCTCTTGATAATCATGATTCTGATATTCATGACTGGTCAATCAGAAGGAGGAAGTGCATGTTCGAAAGGTTTGGGTGCATGTGGCCCCAGAGGAGATTGTGACAAGAGGTGTAAAGCTGAATTCAGTGATGGACAAGGTTCCTGTGAGTTAAACTTGTGCACTTGCTATTACAATTGTGCACCACCAGGTCCGCCAGCTCCTAAAAAGTGCAACATTAATCTTGGGGTTTGCACTGAGAATTGCAATGAAGATTGTTGTATCTCAAAATGTGCAACCCAATACAGACAGGGTCAAGGAAGATGTACCAACCTCATTGGTGTTGGGTGGTCATGGTGGATCAAAACAAATGAACATGGCTGGCGCACTCAAAGCCATGAATGTGATGGTAGGAGGTCAATGTTGTTAGGCAACTTACAAGTGTTCTTGTGCGTGAAAGAAAGTCCCCTGAGGCTGTGCTTGAGTGCTGGTTTTCAAGAACTCTCCCGTTGGCCTCGAGAGAATGACATGAAAAAGAAGTTCCCAAAAAAACTCCTGCTCCACCATGACTGA 579 0.4404 MLNHISLYYLLLIIMILIFMTGQSEGGSACSKGLGACGPRGDCDKRCKAEFSDGQGSCELNLCTCYYNCAPPGPPAPKKCNINLGVCTENCNEDCCISKCATQYRQGQGRCTNLIGVGWSWWIKTNEHGWRTQSHECDGRRSMLLGNLQVFLCVKESPLRLCLSAGFQELSRWPRENDMKKKFPKKLLLHHD 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01515 192 PANTHER DEFENSIN-LIKE PROTEIN 183 1 113 IPR039641 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01515 Cca-Chr8 44607799 44611151 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g01515 6 114 Plant Defensins Gene Families AT5G38330 38.596 3.85e-12 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01515 - K06237 gsj:114386687 113.62