Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01508 ATGAGGTTCGGGTGTGTATTTATGCCGATTCTGCTTTGCCTTGTGGTGTCTGCCAAGGCAGAGATTTACATAGTGACCGTTGAGGGAGAGCCTGTTGTGAGTTACAAGGGCGGTGTCGATGGCTTTGAAGCCACTGCGGTGGAATCtgatgatgatcatcatcatcatgataaggttgatTCCACAAGTGAAGTTGTTGTTTCTTACGCTCGCCACCTTGAAAAGAGACACGACATGCTTCTGGGGATGCTGTTTGAGAGTGGGACGTACGATAAGCTCTATAGCTATCGACATCTTATAAACGGGTTCGCTGTTGATCTTTCGCCAGAACAGGCGGAAACCCTTAGACATGCTCCTGGGGTGAAGTCTGTTGAGAGGGACTGGAAGGTGAAGAGGCTCACAACACATACCCCAGAATTTTTGGGGCTTCCGACTGGGGTATGGCCTTCAGGAGGAGGCCATGATCGGGCTGGAGAAGACATTGTGATTGGATTGGTGGACTCTGGAATTTATCCTCACCATCCAAGTTTTACTACTTATAATACTGAACCATATGGGCCAGTTTCCAGATATAGAGGAAAATGTGAAGTTGATCCTGACACCAAAAGAAGTTTCTGTAATGGTAAAATCATTGGAGCACAACATTTTGCTCGAGCTGCAATAGCTGCTGGGGCATTCAACCCTATAGTTGATTTTGCTTCGCCTCTGGATGGGGATGGGCATGGGAGTCATACAGCCTCTATTGCAGCTGGAAGAAATGGAATACCTGTGAGGATGTACGGACATGAATTTGGGAAAGCAAGTGGAATGGCTCCCCGAGCCAGGATTGCTGTGTACAAAGCACTCTATAGACTCTTTGGAGGATTTGTTGCAGATGTAGTTGCTGCAATTGATCAGGCTGTGCATGATGGGGTGGATATACTTAGCCTTTCAGTTGGACCAAATAGTCCTCCATCAAACACCAAAACTTCATTTTTGAACCCTTTTGATGCTACACTTCTTGGAGCTGTGAAAGCTGGTGTTTTTGTCGCACAGGCTGCTGGAAATGGTGGTCCTTTTCCTAAGTCATTAGTTTCATATAGTCCATGGATTGCGACTGTAGCAGCAGCAATTGATGATCGTAGATATAAAAACCATCTGATCCTTGGAAATGGAAAAATCATAGCTGGAATTGGATTGTCACCTTCTACACGTTTAAACAACACATACACATTGGTTGCTGCAAATGATGTGCTTCTAGACTCTTCGGTTATAAAGTACAGCCCTACTGACTGCCAGAGGCCAGAAGTTTTAAATAAGAACTTAATAAAGGGAAACATTCTTCTCTGTGGCTATTCTTACAATTTTGTTGTTGGCTCTGCATCAATAAAGAAAGTTTCAGAAACGGCAAAGGCCCTTGGAGCAGTTGGATTTGTTCTGTGTGTTGAAAATGTTTATCCTGGAGCAAAATTTGATCCGGTCCCTGTTGGCCTTCCTGGGATTCTAATCACAGATGTCAGCAAGTCTAAGGAACTGATAGATTATTATAATATCTCCACACCAAGAGACTGGACTGGAAGGGTGAAGAGTTTCAAAGGTACAGGTAAAATTGAGGACGGTTTGATGCCTATTCTCCATAAATCTGCACCACAAGTAGCATTGTTTTCTGCTAGAGGGCCAAATATAAAGGACTTTAGTTTCCAAGAGGCAGATCTTCTCAAACCAGATATATTAGCTCCGGGTTCATTGATTTGGGGTGCTTGGTCTCTAAATGGAACTGATGAACCAAATTATGTCGCAGGAAAGGGGTTTGCCATGATATCTGGGACTAGTATGGCTGCACCACACATAGCTGGAATTGCAGCTCTTATAAAGCAGAAACATCCACATTGGAGCCCTGCTGCCATTAAATCAGCCTTGATGACAACATCAACAACTCTAGACAGAGCAGGAAATCCTATTTTAGCACAGCAATATTCTGAAACAGAAGCTATGAATCTGGTCAAAGCCACTCCTTTTGATTATGGGAGTGGGCACGTTAATCCAAGAGCAGCCTTGGACCCTGGCCTTATCTTTGATGCAGGATACGAGGATTATCTTGGGTTCTTGTGCACAACACCTGGCATTGATGTTCATGAGATAAAGAACTACACAAACTCGCCATGTAACTACACCATGGGCCACCCATCAAACCTAAACACTCCATCCATCACAGTTTCCCATCTTGTAAGAACTCGAATAGTCACACGCACTGTGACAAATGTTGCTGACGAGGAAGAAACCTACGTGATCACAGCAAGGATGCAACCAGCAGTTGCCATAGACGTGAACCCTCCAGCAATGACCATCAAAGCAGGTGCGTCACGTAAGTTTTCCGTGACACTCACTGTTCGCTCAGTGACAGGAACCTATAGTTTTGGAGAGGTGTTAATGAAGGGAAACAGAGGGCACAAGGTGAGGATCCCAGTTCTGGCCAATGGATACTCAAGATAG 2472 0.4409 MRFGCVFMPILLCLVVSAKAEIYIVTVEGEPVVSYKGGVDGFEATAVESDDDHHHHDKVDSTSEVVVSYARHLEKRHDMLLGMLFESGTYDKLYSYRHLINGFAVDLSPEQAETLRHAPGVKSVERDWKVKRLTTHTPEFLGLPTGVWPSGGGHDRAGEDIVIGLVDSGIYPHHPSFTTYNTEPYGPVSRYRGKCEVDPDTKRSFCNGKIIGAQHFARAAIAAGAFNPIVDFASPLDGDGHGSHTASIAAGRNGIPVRMYGHEFGKASGMAPRARIAVYKALYRLFGGFVADVVAAIDQAVHDGVDILSLSVGPNSPPSNTKTSFLNPFDATLLGAVKAGVFVAQAAGNGGPFPKSLVSYSPWIATVAAAIDDRRYKNHLILGNGKIIAGIGLSPSTRLNNTYTLVAANDVLLDSSVIKYSPTDCQRPEVLNKNLIKGNILLCGYSYNFVVGSASIKKVSETAKALGAVGFVLCVENVYPGAKFDPVPVGLPGILITDVSKSKELIDYYNISTPRDWTGRVKSFKGTGKIEDGLMPILHKSAPQVALFSARGPNIKDFSFQEADLLKPDILAPGSLIWGAWSLNGTDEPNYVAGKGFAMISGTSMAAPHIAGIAALIKQKHPHWSPAAIKSALMTTSTTLDRAGNPILAQQYSETEAMNLVKATPFDYGSGHVNPRAALDPGLIFDAGYEDYLGFLCTTPGIDVHEIKNYTNSPCNYTMGHPSNLNTPSITVSHLVRTRIVTRTVTNVADEEETYVITARMQPAVAIDVNPPAMTIKAGASRKFSVTLTVRSVTGTYSFGEVLMKGNRGHKVRIPVLANGYSR 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01508 823 SUPERFAMILY Subtilisin-like 133 683 IPR036852 GO:0004252|GO:0006508
Cca08g01508 823 Pfam Peptidase inhibitor I9 23 131 IPR010259 -
Cca08g01508 823 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 163 174 IPR023827 -
Cca08g01508 823 Pfam Subtilase family 158 644 IPR000209 GO:0006508|GO:0008236
Cca08g01508 823 PANTHER CUCUMISIN-RELATED 13 822 - -
Cca08g01508 823 CDD PA_subtilisin_like 380 518 - -
Cca08g01508 823 SUPERFAMILY Protease propeptides/inhibitors 90 130 - -
Cca08g01508 823 ProSitePatterns Serine proteases, subtilase family, serine active site. 602 612 IPR023828 -
Cca08g01508 823 Gene3D Peptidase S8/S53 domain 160 692 IPR036852 GO:0004252|GO:0006508
Cca08g01508 823 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 13 822 IPR045051 -
Cca08g01508 823 PRINTS Subtilisin serine protease family (S8) signature 158 177 IPR015500 -
Cca08g01508 823 PRINTS Subtilisin serine protease family (S8) signature 237 250 IPR015500 -
Cca08g01508 823 PRINTS Subtilisin serine protease family (S8) signature 601 617 IPR015500 -
Cca08g01508 823 Pfam Fibronectin type-III domain 724 817 IPR041469 -
Cca08g01508 823 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 16 132 IPR037045 -
Cca08g01508 823 Gene3D - 696 820 - -
Cca08g01508 823 Gene3D - 373 538 - -
Cca08g01508 823 ProSiteProfiles Serine proteases, subtilase domain profile. 127 679 - -
Cca08g01508 823 CDD Peptidases_S8_3 134 638 IPR034197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01508 Cca-Chr8 44481244 44488521 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g01508 1 823 Subtilisin-like Serine Gene Family AT4G30020 78.398 0.0 1338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01508 - - gmx:100784999 1496.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g01508 08 44481244 44488521 Cca08g01508 08 44481244 44488521 ECH
Cca11g02430 11 51256553 51261761 Cca08g01508 08 44481244 44488521 PCT