Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01499 ATGACACCAAGTTGTGGAAGAACCTATGGCTATGGATTCAATTTGCACTTCATTAAATCTTGTTCATCCACATCCACCCTAACTTCACCTACCTCTTCAACTACCTCAGAAACCACCAACTCTCCCCAATCCCAATCAATCTTCACCACCAAACCTCGAACCCTCCGAAAGCGACTCAACCAAACCTACAACGAAGCCGCGACACTCCTCTCCACAGCGCACCCCAATCTCTTCTCCGCTAAAAACCTAATAAAACCCCAACGCTTCACCAAACCGTTAACGGAACACACCAACGACTCTTCAGAACCGTTATTACTGTTCAGAGAGTATCACCAtaacgataacggtaacggtaagggtaacggtaacggtaGCGACGCTTTCTCTTTTCTACGCGAAGGAAAACGCGGTTTGAGAACGGGGCCAAACAAGGCCTTCTTCGGTGTGCGAGAGAAGCCATGCGAGTTCAGCGCGGGAATAGCGAACTGCGACGAGTTCGAGAGCGAGGACTTCGACTGCGAATCGATTTTGGACGAGGAAATTGATGAAGGAATCGATAGCATCATGggagggagagtggaagacggaggcggcggcggtggtggtggtggttgcggcgAATTTTGTTGCGGCGGCGAACGGCGGAGTCCGTGGTTTGGTGTGAGGGCTCTGCGGCGAGTTGAGGATGCGAGCTGGTGGAATTTTCTGGTGGTTGATATGGTTGAGATCTCGCCGGGGATGAAGAAGGATGCGACGGAGGGTTTGGTTCCGGCGACGGagaaaaagaataataataataagaagaagaagaagaagaagaaggtgaagaagGAATTGGCGGAGATGGGAGTGGGTGAGGGTTTGTTGCTGAAGTTGAATTACGACGACGTTCGGAATGCTTGGTCGGACCGGGGGTCGCCGTTCGCCGGTGGCTCGCCGGGAAATGGCGTCGCCGGCAGTGTGAAATCTAAAAGGAAAAAGGACACGTGGACAGGGAATTGA 1002 0.4471 MTPSCGRTYGYGFNLHFIKSCSSTSTLTSPTSSTTSETTNSPQSQSIFTTKPRTLRKRLNQTYNEAATLLSTAHPNLFSAKNLIKPQRFTKPLTEHTNDSSEPLLLFREYHHNDNGNGKGNGNGSDAFSFLREGKRGLRTGPNKAFFGVREKPCEFSAGIANCDEFESEDFDCESILDEEIDEGIDSIMGGRVEDGGGGGGGGGCGEFCCGGERRSPWFGVRALRRVEDASWWNFLVVDMVEISPGMKKDATEGLVPATEKKNNNNKKKKKKKKVKKELAEMGVGEGLLLKLNYDDVRNAWSDRGSPFAGGSPGNGVAGSVKSKRKKDTWTGN 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01499 333 MobiDBLite consensus disorder prediction 303 333 - -
Cca08g01499 333 Coils Coil 258 278 - -
Cca08g01499 333 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 1 322 - -
Cca08g01499 333 MobiDBLite consensus disorder prediction 28 47 - -
Cca08g01499 333 PANTHER - 1 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01499 Cca-Chr8 44316916 44320405 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01499 - - ccaj:109804447 581.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g01499 08 44316916 44320405 Cca08g01499 08 44316916 44320405 ECH
Cca11g02435 11 51308479 51311575 Cca08g01499 08 44316916 44320405 PCT