Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01484 ATGGCTTCTAACTACTTCCTCTTGTTTGTTCTTGTTGCTGCTACTTTACTTTCTAAAGCAAATGCTAAAAAGACGTTATTTTCGGACTTCTACTCTAGCAGCTGCCTGGAACTCTTGCCTATAGTGCAAAAAGTAGTTATAAAAGCCATTAAAAATGAAACTGGCGGAGGAGCTTCCTTACTCCAATTGCTTTTCCATGACTGCTTTGTAAATGATGATACAAGCAATTTCATAGGAGAGAAAATAACAACACTTAACAATAATTCAGCAAGGGGATTCAATGTCATCGATGACATTAAAGCCAAGGTGGAGAAAGCATGCCCAAGGCTAGGGGGACCATTGTGGAAAGTAAGCTTGGGGAGAAGAGATTCTATCATAGCTAGCAGAGTTGATGCCAATAACTCCATTCCTTCACCCTTACTCAATCTAACCGCTCTCAAAAGGAGTTTCTCTAACTAG 459 0.3987 MASNYFLLFVLVAATLLSKANAKKTLFSDFYSSSCLELLPIVQKVVIKAIKNETGGGASLLQLLFHDCFVNDDTSNFIGEKITTLNNNSARGFNVIDDIKAKVEKACPRLGGPLWKVSLGRRDSIIASRVDANNSIPSPLLNLTALKRSFSN 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01484 152 Gene3D - 110 136 - -
Cca08g01484 152 PANTHER PEROXIDASE 72-RELATED 110 151 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca08g01484 152 PANTHER PEROXIDASE 72-RELATED 7 109 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca08g01484 152 Pfam Peroxidase 42 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca08g01484 152 SUPERFAMILY Heme-dependent peroxidases 26 151 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cca08g01484 152 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca08g01484 152 PRINTS Plant peroxidase signature 91 104 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca08g01484 152 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca08g01484 152 PRINTS Haem peroxidase superfamily signature 111 123 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca08g01484 152 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca08g01484 152 Gene3D - 26 109 - -
Cca08g01484 152 ProSiteProfiles Plant heme peroxidase family profile. 25 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca08g01484 152 PANTHER PEROXIDASE 110 151 - -
Cca08g01484 152 PANTHER PEROXIDASE 7 109 - -
Cca08g01484 152 Gene3D Peroxidase, domain 2 137 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01484 Cca-Chr8 43874018 43874724 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g01484 23 151 Peroxidase AT5G05340 47.097 2.89e-39 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01484 K00430 - gmx:100793973 167.162