Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01463 ATGTTGCAATGGGGGCATATGGACAGCAAAAGATTGTGCACCCACCACACCACCATCTTGAGGCCATTGTCTTTGCACTACAATCCAAGAAAACCATCACTCACTGCTGGCCAACCAATCTACACTACCCCTTGCCCTAAGGCCCTTATCTCACTCTCTAACATTAATACACGACTCTTCTGGCTCTTGCCCTTTTCACTAAAGACTATTGTTCTGCCTTGTTTCATAACCTTCCTTCTCATTGCTTTGGTGTCACTATATAGATTGTCTTTGGAGATTGGGATGGAGATGGGGGTGGTTTTGTCACTGATTCTGCAGCTAGTGAAACTCTGCATCATTGGCTTTGTTGTGGCATTCCAAGGATCTGAAGGGTCTGTTATATCCCCATCTCCAGCATTCCTTCCAGTCATTCATCCTAATGGAGAAGCACCTGGTCCCATCCATCATGGACTGTCATGGGGAAGCAGTGCACCAAACTCATCTTCAGATCAAAATGGGTCTGCTATATCACCATCTCCAGAAACCATACCTGTGGATCCTTCCCCTAGTGAAGCACCTAGACTTCTACACCCAAGAGAACCATGGAGAACCCTTGCACCAAGTCCTCAAGAAGTATCAAATGGGTCACTCTTGCCCCCTCCAGTTACATTACCACCTCCTACATCAGCTCCAACTCCTCAGAAGATCATAGGATTTGGACCATCTATATCTCCTAGTAGTACAAGCACCATAACATCATCACCATCAACTTCTGAAGGTAATGTGCCTCCATCCATACAACCAAGTCCACCACAAAGCAAAACACCTGCAATTAGGCCTCCTGTATCCACACCAATTGCTCCAGCCTCCATTGTAACTCCGTCTGGAAATTTGCCAAAAACTTCACCAGCCAGCCAGCCAATTGAACATGGAAGTTTGCCCCCTAAGATTGATGAGAGGAATAAGAGTCACAAGCCAGAGCCAGCTTTGCCAGCTCCAATTCCCATACCTTCTACCACATTGCCCAAAATTTCACCAGTAAGCCAACCAGCTGAAAATGGAAGTTTGCCTCATAGAGAGGGTGCAAATACCCCTACAGTATTCAGTTTGCCCGAACATTCGCCAGCGAGCCAACCAACTGAACATGGAAGTTTGCCTCCAACTGTTCCCAGAAGGAATAACAACACTGGTCACACATTGGAACCAGTTTCACTAGCTCCAGTTGCAACACCTCCGGCAAATTTACCAAAAAATTCATCAGTCAGTCAACCAGTTCATCATGGAAATTTCCCGCCCGATCTTCACAATAGAACTACAAATAATGGTCACAGTCACACCCCAGTAATGCCACCATCTGTTACATCACCAAGTAGTCCACTTCCAGTAGATCCACCATTGGTACACCCAGTCATACCATTACCGGCAGCAACTCCTTCAAAATTACCAGCACCTGTTGTTTCTCCTGCATTAACACCTTCCAGAAGTTTCAATTGGAAAAAAGGTGGAGAACCAGTTTCTGCACCTGTGTACAAAACACCAAAACCACTACCGGCAATACTACATTCCCATGCTCAAGCGCCTGTTGTCTCTCCTGCATTAACACCTTCCAAAAGTTTCAATTGGAAAAAAGGTGGAGAACCAGTTTCTGCACCTCCATACAAAACACCAAAGCCACTGCCAGCCATTGTACATTCCCCTGTTCAAGCTCCTTCAGAACATAAAGCAAGGCAATTTCACCATGCTCCTGAGCCACTTGTTTCATCTCCTAAATCTCCTTTCAACAAAGGTCATTCTCCCGCATCTTCACCTTCAACCACATTTTATAAGCATCATCATACAAGGAACACAATCATCAGCCCTGCTCCTGCATCATCAAATTTGGTTTCTCCTCCCACTTCAAAACACCAAGATGAACCAATTTCTCCATCACTACGAACAAGTAGACGAAGACACCAAGCTCCACCACCAATGAACACAGGTTTCTCAGGTTCCCCATTTTCCTTCCCTATTCAATCACCAGTGAGCAAGGTTTCACCTGCTCCTTCTCCATCATTCAAAATATCCCCCCACTCAACCAAAATTCCATTACATCCTCCTAAAGTATCTCCTTCTCAACCTCCTTCCAAGAGCCCTAAGAAGCCAGTCCTGCCTCGTGTTCAAGCACTGCCACCCCCACCTCCCAATGAAGATTGTATATCAGTGGTTTGCACAGATCCCTTGACAAACACTCCACCTGGAGCACCTTGCAAATGTGTCTGGCCCATGAAAGTCGGTCTCCGCCTTAGTGTTTCTCTGTATACTTTCTTCCCTTTGGTTTCAGAGTTTGCTTCTGAAATTGCCACTGGGGTATTCATGAAGCAAAGTCAAGTTCGCATTATGGGAGCCGATGCAGCAAACCAGGAACCAGAAAAATCTGTCGTATTCATTGATTTGGTACCACTTGGGGAAGAATTTGATAACACTACAGCCTTTTTAACTTCTGAGAGATTTTGGCATAAACAGGTTGTTATAAAGACTTCTTACTTTGGTGATTATGACGTGTTGTATGTGACCTATCCAGGTTTGCCTCCATCTCCTCCTATACCTCCTTCAAGCATTAGCATCATTGATGGTGGTCCATATTCGGGTGGTGGCAATAATGGTAGGACAATAAAGCCTCTTGGGGTTGACATACCAAAGAGACAGCATAAAGGTGGACTTAGCAAAGGCATAATTGCTATTATTGCTCTTTCAGCTTTTCTAGTAGTTGTTTTATGCTTTGCTGCTGCTTTGGCCGTGTTCAAGTTCAGAGATCATGCGAGTCAACCAACATCAACCCCACGGGTTTTGCCTCCTTCTCTTACCAAAGCACCAGGTGCTGCCGGATCATCAATTGGAGGTGGGCTTGCTTCAGCTTCAACATCATTTCGATCTAGCATTGTTGCTTATGCAGGATCTGCCAAGACTTTCAGCATGAATGACATTGAGAAAGCCACAGATAATTTCCATGATTCTAGAGTGCTTGGAGAAGGTGGTTTTGGGCGTGTTTATAGTGGCACCCTTGAAGATGGAACAAAAGTGGCAGTCAAGGTTCTAAAAAGGGAGGATCATCACGGTGACCGTGAATTCCTATCTGAAGTTGAGATGCTTAGCCGGCTTCACCATAGAAACTTGGTTAAGTTGATTGGTATATGTGCAGAGCTCAGCTTCCGGTGCCTGGTTTATGAACTCATTCCAAATGGCAGCGTGGAATCCTATTTACATGGAGTTGACAAGGAAAACAGTCCACTTGATTGGAGTGCTCGGATAAAGATAGCTCTTGGTGCTGCTCGTGGACTGGCTTATCTACATGAAGATTCAAGTCCCCATGTTATACATAGGGACTTCAAGTCTAGCAATATCTTGCTGGAAAATGATTTTACACCAAAAGTATCTGATTTTGGATTGGCCCGGACTGCAGCTGATGAGGAGAACAGACACGTATCAACTCGTGTCATGGGAACTTTCGGTTATGTGGCTCCGGAGTATGCAATGACTGGCCATCTTCTAGTGAAGAGTGATGTCTACAGCTATGGTGTTGTCCTCCTTGAGCTTTTAACTGGAAGAAAACCAGTAGACATGTCACGACCACCCGGTCAAGAGAATCTCGTTGCATGGGCTCGTCCATTACTCTCGAGTGAAGAAGGATTGGAAGCTATAATTGATCCATCTCTAGGAACTGATGTGCCTTCTGATAGTGTGGCTAAAGTTGCAGCCATTGCTTCAATGTGTGTCCAACCGGAGGTGTCAGACCGTCCTTTCATGGGCGAGGTTGTCCAGGCTTTAAAACTTGTGTGCAATGAATGTGATGAAGCAAGAGAAGCAGGTTCAAGTTCTAGCTCTGTTGACTTGAGCAACTCTAGACAACTATCAGATAACGTCCAAGGCCAATTCTCAGGCACCAACTATGATTCTGGAGTTGATATTGAAAACGGGCTGTTGGCATCAGAGTTGTTCAGCTCATCTGCAAGATATGGAAGGAGAGTGTCTGGATCATTCAGAAGACATTCTTATTCGGGTCCTCTGAGTACCGGGAGAAGCAAGCGGTTGTGGCAGATAATTAGAAGGCTTTCTGGTGGTAGTGTGAGTGAACATGGAACTATGTTCAAGTTATGA 4113 0.452 MLQWGHMDSKRLCTHHTTILRPLSLHYNPRKPSLTAGQPIYTTPCPKALISLSNINTRLFWLLPFSLKTIVLPCFITFLLIALVSLYRLSLEIGMEMGVVLSLILQLVKLCIIGFVVAFQGSEGSVISPSPAFLPVIHPNGEAPGPIHHGLSWGSSAPNSSSDQNGSAISPSPETIPVDPSPSEAPRLLHPREPWRTLAPSPQEVSNGSLLPPPVTLPPPTSAPTPQKIIGFGPSISPSSTSTITSSPSTSEGNVPPSIQPSPPQSKTPAIRPPVSTPIAPASIVTPSGNLPKTSPASQPIEHGSLPPKIDERNKSHKPEPALPAPIPIPSTTLPKISPVSQPAENGSLPHREGANTPTVFSLPEHSPASQPTEHGSLPPTVPRRNNNTGHTLEPVSLAPVATPPANLPKNSSVSQPVHHGNFPPDLHNRTTNNGHSHTPVMPPSVTSPSSPLPVDPPLVHPVIPLPAATPSKLPAPVVSPALTPSRSFNWKKGGEPVSAPVYKTPKPLPAILHSHAQAPVVSPALTPSKSFNWKKGGEPVSAPPYKTPKPLPAIVHSPVQAPSEHKARQFHHAPEPLVSSPKSPFNKGHSPASSPSTTFYKHHHTRNTIISPAPASSNLVSPPTSKHQDEPISPSLRTSRRRHQAPPPMNTGFSGSPFSFPIQSPVSKVSPAPSPSFKISPHSTKIPLHPPKVSPSQPPSKSPKKPVLPRVQALPPPPPNEDCISVVCTDPLTNTPPGAPCKCVWPMKVGLRLSVSLYTFFPLVSEFASEIATGVFMKQSQVRIMGADAANQEPEKSVVFIDLVPLGEEFDNTTAFLTSERFWHKQVVIKTSYFGDYDVLYVTYPGLPPSPPIPPSSISIIDGGPYSGGGNNGRTIKPLGVDIPKRQHKGGLSKGIIAIIALSAFLVVVLCFAAALAVFKFRDHASQPTSTPRVLPPSLTKAPGAAGSSIGGGLASASTSFRSSIVAYAGSAKTFSMNDIEKATDNFHDSRVLGEGGFGRVYSGTLEDGTKVAVKVLKREDHHGDREFLSEVEMLSRLHHRNLVKLIGICAELSFRCLVYELIPNGSVESYLHGVDKENSPLDWSARIKIALGAARGLAYLHEDSSPHVIHRDFKSSNILLENDFTPKVSDFGLARTAADEENRHVSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSRPPGQENLVAWARPLLSSEEGLEAIIDPSLGTDVPSDSVAKVAAIASMCVQPEVSDRPFMGEVVQALKLVCNECDEAREAGSSSSSVDLSNSRQLSDNVQGQFSGTNYDSGVDIENGLLASELFSSSARYGRRVSGSFRRHSYSGPLSTGRSKRLWQIIRRLSGGSVSEHGTMFKL 1370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01463 1370 ProSiteProfiles Protein kinase domain profile. 988 1264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca08g01463 1370 MobiDBLite consensus disorder prediction 281 301 - -
Cca08g01463 1370 MobiDBLite consensus disorder prediction 352 394 - -
Cca08g01463 1370 MobiDBLite consensus disorder prediction 650 682 - -
Cca08g01463 1370 MobiDBLite consensus disorder prediction 148 453 - -
Cca08g01463 1370 MobiDBLite consensus disorder prediction 536 717 - -
Cca08g01463 1370 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 540 1370 - -
Cca08g01463 1370 MobiDBLite consensus disorder prediction 1275 1296 - -
Cca08g01463 1370 MobiDBLite consensus disorder prediction 584 633 - -
Cca08g01463 1370 Gene3D Phosphorylase Kinase; domain 1 960 1063 - -
Cca08g01463 1370 Gene3D Transferase(Phosphotransferase) domain 1 1064 1286 - -
Cca08g01463 1370 MobiDBLite consensus disorder prediction 257 276 - -
Cca08g01463 1370 ProSitePatterns Protein kinases ATP-binding region signature. 994 1016 IPR017441 GO:0005524
Cca08g01463 1370 PANTHER OS01G0750732 PROTEIN 540 1370 - -
Cca08g01463 1370 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1110 1122 IPR008271 GO:0004672|GO:0006468
Cca08g01463 1370 MobiDBLite consensus disorder prediction 232 256 - -
Cca08g01463 1370 MobiDBLite consensus disorder prediction 153 174 - -
Cca08g01463 1370 SUPERFAMILY Protein kinase-like (PK-like) 968 1261 IPR011009 -
Cca08g01463 1370 MobiDBLite consensus disorder prediction 692 717 - -
Cca08g01463 1370 CDD STKc_IRAK 994 1262 - -
Cca08g01463 1370 Pfam Protein tyrosine and serine/threonine kinase 991 1261 IPR001245 GO:0004672|GO:0006468
Cca08g01463 1370 MobiDBLite consensus disorder prediction 426 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01463 Cca-Chr8 43393334 43406119 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g01463 396 1366 Receptor kinase-like Gene Family AT5G56890 53.486 0.0 863
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Cca08g01463 PK_Tyr_Ser-Thr 3e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01463 - - ccaj:109805519 2296.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g01463 08 43393334 43406119 Cca08g01463 08 43393334 43406119 ECH