Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01407 ATGGGTGATGTTCTAAGCCCCTTCACAATCTCATCCCCTCCTCCACCCTCTTCCCCCTCAAACAAGAACAATAGCATGCCCATGTTGTACTATGGCCTAGTGGTAGTTGGAACCGCAGCCATAGTGCTAGCCTTATACAACCTCGTTCTCCTCCGACGCAGCCATGCGCGCGTGTCGCGCGCACAGCATGCAGAGTCGAATCGAGGAGAAGGAGTTATGGAAAGAGGAAGGAGTCTCGACAACCAGTCCAAGAACTTGTTGTCGAGCTTCAAGTACACTAAGGAAGTCGTGGCAACGAAAGAAGAGGAGGATTTCGAGTGCCCCGTTTGCTTATCGGTTTATGAAGAAGGAGAAGAGAACACCCGTTGGGCCTCTTTGTTCGCCTGA 387 0.5168 MGDVLSPFTISSPPPPSSPSNKNNSMPMLYYGLVVVGTAAIVLALYNLVLLRRSHARVSRAQHAESNRGEGVMERGRSLDNQSKNLLSSFKYTKEVVATKEEEDFECPVCLSVYEEGEENTRWASLFA 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01407 128 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 11 119 IPR044675 -
Cca08g01407 128 MobiDBLite consensus disorder prediction 1 22 - -
Cca08g01407 128 PANTHER RING-H2 FINGER PROTEIN ATL52-LIKE 11 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01407 Cca-Chr8 42063464 42064414 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01407 - - ccaj:109817798 237.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g02519 11 52330464 52332537 Cca08g01407 08 42063464 42064414 PCT