Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01383 ATGCCTCCCATGTCGACGATTCCACTTCACAGACCTGAATTTCATTCCTTGTTCTTCAATGGGTCTCCAAATTCTTATAAATGCCCGAGAATCACTGCCTCGTGGACCATGGCCATGGATTCGAAATTTTCTCCAACAGTGAAGAATAATGGTGATAATAACTATAATATGAAGAAGGAAGAACTCTCTGTGCAGCTTTCAACTCGACGCGTTTCCAAAGTGGAAACTTTAAGCTCCAATGATCTCCAATTTGATCGATTGCAGCCATCGGATCAAGAATTGGGTCGAGTAAATAGGTTTGAGTTTGGGCAATTTGTTGCACGAGAAGCTGTGCTTGATGAAGAGTATTGGACAGCAGCGTGGTTAAGGGCAGAAAGTCACTGGGAGAATCGAGCATATGAAAGGTATGGCATGGCATATACGTCAGAAGAGGAATTTAATGCATTGAAAAGGCGGTGCAAGGTGCAAAATGGCGATAGCTGCGCATGTATCATCACGGTGAGGAAGGAGCAGAAGAATGGAAAGCACTCAATATTAAAAAGTGTTGTAGGAACCCTTGATTTGAACATCCGATATTTGCTGCAAGGGGAGACCTTTCCAGGGGAACGGGTAAAGGCTCCTCTGTTTTGTAGCATCAACAGAACACCACCAAGCAGATATGGCTACATTGCGAACTTGTGTGTTATTAAATCGGCTCGGCGGCAGGGAATTGCCAGGAACATGATGTCTTTTGCTATTGAAGCTGCAAAATCTAATGCAGGTGTGACACAAGTATATGTCCATGTAGACAAAAATAATAGGCCTGCACAGATATTGTACCAAAAGATGGGCTTCGAGATGGTTGAAATGGCAAACTCCAGGTCGTTACTTTGGAGCAATTGGGAATTTCAAAATTCGAATCGTCCTGATATCATAGAGAAGGTCAAGCCGGTTAACTGA 939 0.4334 MPPMSTIPLHRPEFHSLFFNGSPNSYKCPRITASWTMAMDSKFSPTVKNNGDNNYNMKKEELSVQLSTRRVSKVETLSSNDLQFDRLQPSDQELGRVNRFEFGQFVAREAVLDEEYWTAAWLRAESHWENRAYERYGMAYTSEEEFNALKRRCKVQNGDSCACIITVRKEQKNGKHSILKSVVGTLDLNIRYLLQGETFPGERVKAPLFCSINRTPPSRYGYIANLCVIKSARRQGIARNMMSFAIEAAKSNAGVTQVYVHVDKNNRPAQILYQKMGFEMVEMANSRSLLWSNWEFQNSNRPDIIEKVKPVN 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01383 312 Gene3D - 109 293 - -
Cca08g01383 312 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 4 289 - -
Cca08g01383 312 Pfam Acetyltransferase (GNAT) family 149 278 IPR000182 GO:0016407
Cca08g01383 312 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 209 295 IPR000182 GO:0016407
Cca08g01383 312 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 119 282 IPR016181 -
Cca08g01383 312 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 4 289 - -
Cca08g01383 312 CDD NAT_SF 209 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01383 Cca-Chr8 41490282 41492900 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Cca08g01383 Acetyltransf_1 2.5e-13 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01383 - - gmx:100795426 509.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g01383 08 41490282 41492900 Cca08g01383 08 41490282 41492900 ECH