Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01372 ATGGGTTCCGTTTCCGTTTTCGTTTCCACTTGGACCTTTGCTTTGTTCTTCCTCGTACAATGCTGGTGCCTATCAGCCAAGAAAACATACATAGTCCGCATGAAGGATGTCTTCAACCCTTCCATTTTCCCCACGCACCGCGACTGGTACAGCGCCAGTCTCCAATCGCTTCTCTCACTttcagattcagattcagattcaaattcaaatgcaaattcaaattcGCTCCTCTATTCCTACACCAACTCCTACAGCGGCTTCGCCGCGTTACTCGACGACGCGCAAGTGCAAGAGCTTCTCAGATCCGATTCCGTGCTCGGAGTCTTCGAGGACACGCTCTACAAACTCCACACCACGCGCACCCCGCAGTTTCTGGGCCTGGACACGCAAACGGGCCTCTGGGAGGGCCACACGGCCCAGGATCTCAACCTAGCCACGCACGACGTTATCGTGGGGGTGCTCGACACCGGAGTGTGGCCCGAGTCTCCCAGCTTCAACGACGCCGGCATGCCGCCCGTCCCCTCGCGCTGGCGCGGCGAGTGCGAGAGCGGCCCCGATTTCTCCGCGAATCTCTGCAATAAGAAACTCATCGGCGCCAGAAGCTTCTCGCGCGGCTTCCACATGGCCTCCGGAGGCGCCTCCAAGGAGCCCGCCTCGCCCAGAGACAGGGACGGCCACGGGACTCACACGGCCAGCACCGCCGCGGGCTCGCACGTGGCCAACGCCAGCCTCCTGGGTTACGCCAGCGGGACCGCACGTGGGATGGCGCCGCTGGCACGTGTCGCGGCTTACAAGGTTTGCTGGACCGACGGATGTTTCGCGTCCGACATTCTCGCCGGGATGGACCACGCCATCCAGGACGGCGTCGACGTGCTTTCTCTCTCCCTCGGCGGCGGTTCCGCCCCGTACTTCCGAGACACCATCGCCATCGGCGCCTTCTCGGCGGTGGAGAAAGGGATCTTCGTTTCCTGCTCCGCCGGGAACAGCGGACCGGAGAAGGCCTCGCTCGCCAACGTGGCGCCGTGGATAATGACCGTCGGGGCTGGAACCTTGGATCGTGATTTCCCTGCTTACGCTGTTCTTGGTAATAAAAAACGGTTCACCGGCGTTTCGCTTTACAGCGGAAACGGAATGGGGATTGAACCGGTTGGTTTGGTTTACAGCAAAGGGTTGAACCAATCCGGGAGCCTCTGCATGGCCGGTTCGCTCGACCCGGCTAAGGTTCGCGGCAAGGTGGTGATATGCGACCGTGGGATCAACGCGCGCGTGGAGAAAGGTAAGGTGGTGCGTGACGCCGGTGGGATTGGGATGATTCTAGCGAACACCGCCGCGAGCGGGGAGGAGTTAGTCGCGGATAGTCACCTGCTACCGGCTGTGGCGGTTGGGAAGATGGTGGGGGAGCAGATCAAGGAGTACGCCACTTCGGATCCTATGCCCACGGCAGTTCTCAGTTTCCGCGGAACAGTTTTGAACGTTAGGCCATCACCTGTTGTGGCAGCTTTCAGTTCCCGAGGGCCCAATATGGTGACGAAACAGATCTTAAAGCCGGATGTTATTGGGCCTGGGGTTAACATCCTAGCAGCTTGGTCCGAAGCCATTGGGCCCTCCGGGATGACTGATGACACTCGCAAGACGCAGTTCAACATTATGTCAGGGACGTCGATGTCATGTCCACACATAAGTGGGTTGGCTGCGTTGCTGAAAGCAGCGCACCCAGAATGGAGTCCCAGCGCGATAAAATCTGCGCTCATGACAACAGCGTACGTCCACGACAACACCAGGTCCCCACTTCACGACGATGCAGGGGCTGGGCTTTCCACGCCGTGGGCTCACGGTGCGGGCCATGTAAACCCGCACAAGGCATTTTCTCCCGGGCTTGTCTACGATGCATCCACTAACGACTACATTAAGTTCCTCTGCTCCCTGGACTACATCCCTGAACAGATACAACTCATTGTTAAGCGTCCCACTGTGAACTGCACCAGGAAATTCTCTGACCCTGGCCAGTTGAACTACCCTTCCTTCTCGGTCTTGTTCGGAAGCAAGAGGGTGGTGAGGTACACGCGCATCTTGACCAACGTCGGCGAGCCTAACTCCGTCTACAACGTCACCGTCGACGCCCCCTCCACGGTGGGGGTCACGGTGAAGCCCGCCAGGCTTGTCTTTGGGAAAGTGGGGGAGAGGCAAAGGTACACGGTCACCTTTGTGTCTAAGAAGGGTGTCACTGATTCCTCTAGGGGTGCGTTTGGTAGCATCATGTGGAGCAATGCGCAACACCAAGTTAGAAGCCCAGTTGCTTTTTCTTGGACTCTTTTGTGA 2319 0.5761 MGSVSVFVSTWTFALFFLVQCWCLSAKKTYIVRMKDVFNPSIFPTHRDWYSASLQSLLSLSDSDSDSNSNANSNSLLYSYTNSYSGFAALLDDAQVQELLRSDSVLGVFEDTLYKLHTTRTPQFLGLDTQTGLWEGHTAQDLNLATHDVIVGVLDTGVWPESPSFNDAGMPPVPSRWRGECESGPDFSANLCNKKLIGARSFSRGFHMASGGASKEPASPRDRDGHGTHTASTAAGSHVANASLLGYASGTARGMAPLARVAAYKVCWTDGCFASDILAGMDHAIQDGVDVLSLSLGGGSAPYFRDTIAIGAFSAVEKGIFVSCSAGNSGPEKASLANVAPWIMTVGAGTLDRDFPAYAVLGNKKRFTGVSLYSGNGMGIEPVGLVYSKGLNQSGSLCMAGSLDPAKVRGKVVICDRGINARVEKGKVVRDAGGIGMILANTAASGEELVADSHLLPAVAVGKMVGEQIKEYATSDPMPTAVLSFRGTVLNVRPSPVVAAFSSRGPNMVTKQILKPDVIGPGVNILAAWSEAIGPSGMTDDTRKTQFNIMSGTSMSCPHISGLAALLKAAHPEWSPSAIKSALMTTAYVHDNTRSPLHDDAGAGLSTPWAHGAGHVNPHKAFSPGLVYDASTNDYIKFLCSLDYIPEQIQLIVKRPTVNCTRKFSDPGQLNYPSFSVLFGSKRVVRYTRILTNVGEPNSVYNVTVDAPSTVGVTVKPARLVFGKVGERQRYTVTFVSKKGVTDSSRGAFGSIMWSNAQHQVRSPVAFSWTLL 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01372 772 PANTHER CUCUMISIN-RELATED 19 769 - -
Cca08g01372 772 MobiDBLite consensus disorder prediction 208 233 - -
Cca08g01372 772 Pfam PA domain 397 469 IPR003137 -
Cca08g01372 772 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 24 117 IPR037045 -
Cca08g01372 772 ProSiteProfiles Serine proteases, subtilase domain profile. 130 622 - -
Cca08g01372 772 Gene3D - 352 490 - -
Cca08g01372 772 Gene3D Peptidase S8/S53 domain 148 635 IPR036852 GO:0004252|GO:0006508
Cca08g01372 772 Pfam Fibronectin type-III domain 669 766 IPR041469 -
Cca08g01372 772 Gene3D - 639 769 - -
Cca08g01372 772 SUPERFAMILY Subtilisin-like 116 626 IPR036852 GO:0004252|GO:0006508
Cca08g01372 772 CDD Peptidases_S8_3 114 588 IPR034197 -
Cca08g01372 772 PRINTS Subtilisin serine protease family (S8) signature 146 165 IPR015500 -
Cca08g01372 772 PRINTS Subtilisin serine protease family (S8) signature 222 235 IPR015500 -
Cca08g01372 772 PRINTS Subtilisin serine protease family (S8) signature 551 567 IPR015500 -
Cca08g01372 772 Pfam Peptidase inhibitor I9 29 117 IPR010259 -
Cca08g01372 772 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 19 769 IPR045051 -
Cca08g01372 772 Pfam Subtilase family 148 591 IPR000209 GO:0006508|GO:0008236
Cca08g01372 772 ProSitePatterns Serine proteases, subtilase family, serine active site. 552 562 IPR023828 -
Cca08g01372 772 CDD PA_subtilisin_like 358 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01372 Cca-Chr8 41281360 41283782 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g01372 15 769 Subtilisin-like Serine Gene Family AT2G05920 68.379 0.0 1058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01372 - - gmx:100797543 1236.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g01372 08 41281360 41283782 Cca08g01372 08 41281360 41283782 ECH
Cca11g02544 11 52597529 52599796 Cca08g01372 08 41281360 41283782 PCT