Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01363 ATGCTATATAATGGTCGTGGTTATGTCCCAGATTATGCTATCCAAGTGTTGATTGATAAATGTCTAATAAAGATTGATCAATGTTATGTGAAAATGCATGTTATGATTGAAGATATGGTAGAGAAATTGTACGGCTTGAATCACCCTCAAAACCATGTGAACGTAGTAGATTATGCCTCTCTAAAGAAATTTTCCGTGTTTTCAAAGAGAACAAGTGTTACTGAATTAGATTATGACACTTTGAGAGCTCTGGACTCTGATACTGTTTCTAGTACTCATTCAATGATTGAGAAAGAGATAAATGTTTTGCCTATTCACTCATATAAAGTTCCTGTCCCACCCAAGTGTTCTACTACATCAGATGTTGTAATTGGATTGAACAGAAAGAGCCTCAATTCTGGCAATTAG 408 0.3505 MLYNGRGYVPDYAIQVLIDKCLIKIDQCYVKMHVMIEDMVEKLYGLNHPQNHVNVVDYASLKKFSVFSKRTSVTELDYDTLRALDSDTVSSTHSMIEKEINVLPIHSYKVPVPPKCSTTSDVVIGLNRKSLNSGN 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01363 135 PANTHER ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN 73 117 - -
Cca08g01363 135 PANTHER TARGET OF ERK KINASE MPK-1 73 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01363 Cca-Chr8 41093119 41096226 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g01363 75 113 C3H Transcription Factor Family AT3G55530 69.231 4.68e-10 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01363 K16283 - ccaj:109800327 79.3369