Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01335 ATGTCGAAAGGAGGAAAACTAACGAAGCTCAAGTCACTCAAGTCAGTGCTCAAGAAGTGGAACTCGTTCAGCTCCAAACACAGCCGCGAAAGCGTCGCCGCCGATGACGACGACGGCGAGTCCCCGTCGCTCCGCCCCGTGTACGTGGGGAAGACGCGGCGGCGGTACCTCGTGAGCGCGGAGGTTGTCGGGCACCCGCTGTTCCGGGAGCTGGTGGACAGGTCCCGCGACGGCTCCGAGGAGGAGGAAGAGGAGACAATCAACGTGGCTTGTGAGGTTGTCCTTTTCGAACACTTGTTGTGGATGCTCCACAATGCCGATCCTCCACCTGAGTCGCTCGATGAACTCGCCGATTTTTACGCGTGTTGA 369 0.5935 MSKGGKLTKLKSLKSVLKKWNSFSSKHSRESVAADDDDGESPSLRPVYVGKTRRRYLVSAEVVGHPLFRELVDRSRDGSEEEEEETINVACEVVLFEHLLWMLHNADPPPESLDELADFYAC 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01335 122 MobiDBLite consensus disorder prediction 21 45 - -
Cca08g01335 122 PANTHER SMALL AUXIN-UP RNA-RELATED 7 122 - -
Cca08g01335 122 MobiDBLite consensus disorder prediction 23 42 - -
Cca08g01335 122 Pfam Auxin responsive protein 14 103 IPR003676 GO:0009733
Cca08g01335 122 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 7 122 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01335 Cca-Chr8 40244535 40245348 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g01335 1 116 Calmodulin-binding Proteins AT4G34750 24.219 9.60e-09 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01335 - - gmx:100806227 167.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g01335 08 40244535 40245348 Cca08g01335 08 40244535 40245348 ECH