Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01294 ATGGTGATTTTGAACCTTGGGAGGAAGGAGGGGCAGGGAATGCGACTTGGGAAATATGAGTTGGGAAAAACTCTTGGAGAAGGCAATTTTGGAAAAGTGAAGTTGGCAAGGGACACCAATTCTGGCAAACTTTTTGCTGTTAAGATCCTTGAGAAGAGCAAGATCATTGACCTCAATAACACTGATCAGATAAAGAGGGAAATATCCACCTTGAAGCTCCTAAAGCATCCCAACGTTGTTAGATTATACGAGGTCTTGGCTAGCAAAACCAAAATCTATATGGTGCTTGAGTACGTGAATGGAGGAGAGTTATTTGACAAAATTGCATCCAAAGGCAAACTTAAAGAAGCTGAAGGTAGAAAGATATTCCAACAGTTGATTGATTGTGTGAGCTTCTGCCACAATAAAGGTGTCTTTCACAGGGATCTCAAGGCAGATGGATTGCTGCATACAACTTGTGGAAGTCCCAACTATGTTGCTCCTGAGATTCTTGCCAATAAAGGCTATGATGGTGCAACATCAGATATATGGTCATGTGGTGTTATCTTGTATGTAATACTAACAGGATACCTTCCTTTTGATGACAGAAATCTTGCAGTTCTCTACCAAAAGATTTTTAAAGGAGATGTTCAGATGCCAAGATGGTTATCACCTGGCTCTCAAAACATTATAAAGAGAATGCTTGATCCTAATCCTAAAACCCGGATAACGATGGCTATGATCAAAGAAGATGAATGGTTCAAGGAAAGTTATACTCCTGCAAATCCAGAAGATGAGGATGAGGAAGAGAATGTATATATTGATGATGAAGCCTTTTCCATCCATGATGTGTCACTTGAAGCAGATCAGGAGGGTCCAAGATCACCAACCCTTATCAATGCATTTCAGTTGATAGGGATGTCTTCAAGCCTAGATCTCTCTGGCTTTTTTGAGCAAGAGGATGTCTCTGAGAGGAAGATAAGATTTACATCCTCCCATTCACCGAAAGATTTGAATGAGAGGATAGAAGACATTGTAACAGAAATGGGATTTAGAGTCCAAAAGAAAAATGGGATGTTGAAAGTGACACAAGAGAGTAAAGAGCAGAAAAGTCTAGGTAGCCTCTCAGTGGCAGCACAGGTGATTGAAATAAGTCCATCCTTGTATGTGGTTGAGTTAAGCAAGGCTTGTGGAGATGCTTCTAAATATAGACAGTTATGCAAGAAGTTATCAAATGATTTGGGTGTTCACCCAAAGCAACAAATAGGAAGCACAGAAGATTTGGAAGCCAGATAA 1275 0.4016 MVILNLGRKEGQGMRLGKYELGKTLGEGNFGKVKLARDTNSGKLFAVKILEKSKIIDLNNTDQIKREISTLKLLKHPNVVRLYEVLASKTKIYMVLEYVNGGELFDKIASKGKLKEAEGRKIFQQLIDCVSFCHNKGVFHRDLKADGLLHTTCGSPNYVAPEILANKGYDGATSDIWSCGVILYVILTGYLPFDDRNLAVLYQKIFKGDVQMPRWLSPGSQNIIKRMLDPNPKTRITMAMIKEDEWFKESYTPANPEDEDEEENVYIDDEAFSIHDVSLEADQEGPRSPTLINAFQLIGMSSSLDLSGFFEQEDVSERKIRFTSSHSPKDLNERIEDIVTEMGFRVQKKNGMLKVTQESKEQKSLGSLSVAAQVIEISPSLYVVELSKACGDASKYRQLCKKLSNDLGVHPKQQIGSTEDLEAR 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01294 424 Pfam NAF domain 289 348 IPR004041 GO:0007165
Cca08g01294 424 ProSiteProfiles Protein kinase domain profile. 19 247 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca08g01294 424 Pfam Protein kinase domain 150 247 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca08g01294 424 Pfam Protein kinase domain 19 149 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca08g01294 424 PANTHER - 144 413 - -
Cca08g01294 424 Gene3D Transferase(Phosphotransferase) domain 1 149 287 - -
Cca08g01294 424 Gene3D Transferase(Phosphotransferase) domain 1 12 148 - -
Cca08g01294 424 SUPERFAMILY Protein kinase-like (PK-like) 16 256 IPR011009 -
Cca08g01294 424 ProSiteProfiles NAF domain profile. 287 311 IPR018451 GO:0007165
Cca08g01294 424 CDD CIPK_C 293 404 - -
Cca08g01294 424 Gene3D Kinase associated domain 1, KA1 288 409 - -
Cca08g01294 424 ProSitePatterns Protein kinases ATP-binding region signature. 25 48 IPR017441 GO:0005524
Cca08g01294 424 PANTHER - 11 145 - -
Cca08g01294 424 PANTHER CBL-INTERACTING PROTEIN KINASE 21 11 145 - -
Cca08g01294 424 PANTHER CBL-INTERACTING PROTEIN KINASE 21 144 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01294 Cca-Chr8 38906485 38912200 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g01294 82 415 CBL-interacting serine-threonine protein kinases AT3G17510 63.260 1.84e-149 427
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Cca08g01294 Pkinase 2.5e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01294 K07198 - gmx:100815660 736.873
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g01294 08 38906485 38912200 Cca08g01294 08 38906485 38912200 ECH
Cca11g02631 11 53587426 53591959 Cca08g01294 08 38906485 38912200 PCT