Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01279 ATGATGGGGAACATAAATGTGGTACATTTGGTGGTGTTTTCGTTGGGGGTGTTGCTACCTTGCTTGTGTCAAGGTGATTCAGATGATGCAACTACTGCTGTGTATGTTGTTACTCTGAGACATGCTCCTGTTTCTCATTACTATGGTGAGTTGAGAAGAGAGGTCAATGGCTTCAAAGATGATGCTGCTCCTACTCCTGGCAGAACTCAATTTCACAAACCAAAAGGGTATGACAACACTACAAAGACAGATAAGAGATATGGCTCTTACATTTCCCGAGTTCACGATTCTTTGTTGAAGAAAGTGTTAAAAGGAGAGAAATATCTGAAGCTCTATAGCTACCATTACCTGATAAACGGATTTGCAGTGCTGGTTACCCAACAACAGGCAGAGAAGCTATCAAGGAGCGGTGAAGTGTCCAATGTGGTTTTGGATTTTTCTGTCAGGACTGCGACTACACATACGCCACAGTTTTTGGGTCTGCCACAGGGAGCATGGTTTCAAGATGGCGGGTTTGAAACCGCTGGAGAAGGTGTTGTTATTGGATTTATTGATACTGGCATAGATCCAACACATCCTAGTTTTGGTGATAATAATTCTGAACATCCATATCCTGTTCCTCCTCATTTTTCTGGCATCTGTGAGGTTACTCGCGACTTTCCATCTGGTTCTTGCAATAGGAAGCTTGTCGGGGCTCGTCATTTTGCAGCTTCTGCCATAACCAGAGGAATATTTAACTCAACTCAGGACTATGCTTCTCCCTTTGATGGTGATGGCCATGGCACGCATACAGCGTCTGTTGCAGCAGGAAACCATGGGATTCCAGTTATTGTTGCTGGGCATCACTTTGGGAATGCTAGTGGGATGGCTCCTCGTTCACACATTGCTGTTTACAAGGCATTATACAAGAGCTTTGGAGGATTTGCCGCAGATGTTGTTGCAGCTATTGACCAGGCAGCTCAGGATGGGGTTGACATAATAAGCTTGTCAATTACTCCTAATAGACGTCCTCCCGGTGTTGCAACGTTCTTCAATCCAATAGACATGGCATTGCTGTCAGCTGTGAAGGCTGGTATTTTTGTAGTGCAAGCAGCAGGAAATACTGGACCATCACCAACAAGCATGTTCTCCTTCAGTCCATGGATCTATACTGTTGGTGCTGCTTCTCATGACCGAGTTTATAGCAACTCCATATTTCTTGGAAATAATGTGACCATACCCGGGGCAGGTCTTGCACCTGGCACAGATGAAAGCAAACTTTATAAACTGATTCATGCACATCATGCTTTGAGCAATGACACAACGGTTGCTGATGATATGTATGTTGGTGAGTGCCAAGATGCAAGTAAGTTCAATAAGGATTTGATCAAGGGGAACCTCTTGATGTGTAGCTATTCAATTCGATTTGTGCTGGGACTCTCCACCATCAAACGGGCCTCAGAAACAGCCAGAAACCTTAGTGCAGCTGGTGTTGTCTTCTATATGGATCCCTTTGTGATTGGTTATCAGCTTAGCCCCGTTCCAATGAAAATGCCTAGCATAATAATTGCTTCCACAAATGATTCCAAGGTTTTAATGCAATACTACAATTCTTCGTTGGAAATAGATGCAGTTTCAAAGAAAATTGTTAAATTTGGGGCTGTAGCCGGAATCTGTGGTGGACTAAAAGCGAACTACAGCAGTGTTGCCCCAAAGGTTATGTATTACTCTGCCAGAGGACCAGATCCTGAGGACAGTCTTCCTCACCAAGCTGACATTTTGAAACCCAACTTGTTAGCTCCTGGAAATTTAATATGGGCTGCTTGGAGTTCTGCTGGCACCGATTCTGTTGAATTCCTAGGTGAGAATTTTGCATTGATGTCTGGCACAAGCATGGCTGCACCACATGTTGCTGGTCTTGCTGCACTAATTAGGCAAAAGTTTCCCAATTTCAGTCCTGCAGCCATTGGATCTGCACTTTCTACTACAGCTTCTCTGTATGACAAGAGTGGTGGGCCAATAATGGCTCAGCGATCATATGCCTCTCCAGAGCTAAACCAGTCTCCCGCGACCCCTTTTGACATGGGAAGTGGTTTCGTGAATGCAAGTGGAGCACTGAATCCTGGTTTGATTTTTGATTCTGGTTATGATGATTACATGTCATTTCTATGTGGTATCAATGGTTCAGCTCCTGTGGTGCTAAACTACACGGGTCAAAATTGCGGACTTTATAACTCTACAGTCTACGGTCCTGATCTGAACTTGCCCTCTATCACCATATCAAAGCTAAACCAATCTAGAACAGTGCTGAGGACAGTCCGAAACATTGCCCAAAATGAATCTTACAGTGTTGGTTGGACTGCTCCTTCTGGGGTTTCAGTGAAAGTGTCTCCAACTCACTTCTGCATTGCCAATGGTGAGAGACAGGTCTTGTCTGTGCTCTTGAATGCAACCCTTAACAGCTCTGTTCCCAGCTTTGGGAGAATTGGGCTGTTTGGGAATCAAGGTCATGTTGTCAACATTCCTCTTTCAGTCATGGTTACAATCTCATCTAACACCACTACCAGCTAA 2550 0.4435 MMGNINVVHLVVFSLGVLLPCLCQGDSDDATTAVYVVTLRHAPVSHYYGELRREVNGFKDDAAPTPGRTQFHKPKGYDNTTKTDKRYGSYISRVHDSLLKKVLKGEKYLKLYSYHYLINGFAVLVTQQQAEKLSRSGEVSNVVLDFSVRTATTHTPQFLGLPQGAWFQDGGFETAGEGVVIGFIDTGIDPTHPSFGDNNSEHPYPVPPHFSGICEVTRDFPSGSCNRKLVGARHFAASAITRGIFNSTQDYASPFDGDGHGTHTASVAAGNHGIPVIVAGHHFGNASGMAPRSHIAVYKALYKSFGGFAADVVAAIDQAAQDGVDIISLSITPNRRPPGVATFFNPIDMALLSAVKAGIFVVQAAGNTGPSPTSMFSFSPWIYTVGAASHDRVYSNSIFLGNNVTIPGAGLAPGTDESKLYKLIHAHHALSNDTTVADDMYVGECQDASKFNKDLIKGNLLMCSYSIRFVLGLSTIKRASETARNLSAAGVVFYMDPFVIGYQLSPVPMKMPSIIIASTNDSKVLMQYYNSSLEIDAVSKKIVKFGAVAGICGGLKANYSSVAPKVMYYSARGPDPEDSLPHQADILKPNLLAPGNLIWAAWSSAGTDSVEFLGENFALMSGTSMAAPHVAGLAALIRQKFPNFSPAAIGSALSTTASLYDKSGGPIMAQRSYASPELNQSPATPFDMGSGFVNASGALNPGLIFDSGYDDYMSFLCGINGSAPVVLNYTGQNCGLYNSTVYGPDLNLPSITISKLNQSRTVLRTVRNIAQNESYSVGWTAPSGVSVKVSPTHFCIANGERQVLSVLLNATLNSSVPSFGRIGLFGNQGHVVNIPLSVMVTISSNTTTS 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01279 849 PANTHER TRIPEPTIDYL-PEPTIDASE II-RELATED 20 842 - -
Cca08g01279 849 Gene3D - 391 559 - -
Cca08g01279 849 CDD PA_subtilisin_like 400 532 - -
Cca08g01279 849 Gene3D Peptidase S8/S53 domain 178 712 IPR036852 GO:0004252|GO:0006508
Cca08g01279 849 Pfam Fibronectin type-III domain 745 838 IPR041469 -
Cca08g01279 849 Gene3D - 716 841 - -
Cca08g01279 849 ProSitePatterns Serine proteases, subtilase family, serine active site. 622 632 IPR023828 -
Cca08g01279 849 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 149 IPR037045 -
Cca08g01279 849 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 20 842 IPR045051 -
Cca08g01279 849 SUPERFAMILY Subtilisin-like 151 703 IPR036852 GO:0004252|GO:0006508
Cca08g01279 849 PRINTS Subtilisin serine protease family (S8) signature 176 195 IPR015500 -
Cca08g01279 849 PRINTS Subtilisin serine protease family (S8) signature 256 269 IPR015500 -
Cca08g01279 849 PRINTS Subtilisin serine protease family (S8) signature 621 637 IPR015500 -
Cca08g01279 849 Pfam Peptidase inhibitor I9 34 151 IPR010259 -
Cca08g01279 849 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 181 192 IPR023827 -
Cca08g01279 849 ProSiteProfiles Serine proteases, subtilase domain profile. 156 699 - -
Cca08g01279 849 CDD Peptidases_S8_3 151 658 IPR034197 -
Cca08g01279 849 Pfam Subtilase family 176 662 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01279 Cca-Chr8 38321433 38330344 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g01279 5 844 Subtilisin-like Serine Gene Family AT4G20430 68.198 0.0 1176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01279 - - gmx:100796456 1576.22