Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01264 ATGGAGTCGAAAAACCTTGGGAGGTTTACGTTGGGGAAGCAGTCGTCACTGGCACCGAAACGCCGCAACGAGGAAGCGGAGCTTCAGAATGAGGGAGACGCCGTTGACCAAAGCGTGAGGTTGATGTATTCGGCATTTGAAGGCGATGTGGATGGTATTCACGAGGTGTTGGAGTCTGGGGTTAGTGTCAATTTCAGGGATATTGATTATCGCACTACTCTTCATGTTGCCGTGTGTGAGGGATTCACTAAGGTCGTTGAGTTTTTGCTCCAGAAAGATGCCAAAGTTGACGCCAAGGATCGATGGGGAAGCACAGGCTTCTTGAGTTTTAAGGCAAGGTTTTTCAATTTCTTTTCAGTTCTACAACTTTAG 372 0.4758 MESKNLGRFTLGKQSSLAPKRRNEEAELQNEGDAVDQSVRLMYSAFEGDVDGIHEVLESGVSVNFRDIDYRTTLHVAVCEGFTKVVEFLLQKDAKVDAKDRWGSTGFLSFKARFFNFFSVLQL 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01264 123 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 9 107 - -
Cca08g01264 123 Gene3D - 30 108 IPR036770 -
Cca08g01264 123 ProSiteProfiles Ankyrin repeat profile. 69 101 IPR002110 GO:0005515
Cca08g01264 123 PANTHER INTEGRIN-LINKED KINASE FAMILY PROTEIN 9 107 - -
Cca08g01264 123 SUPERFAMILY Ankyrin repeat 40 107 IPR036770 -
Cca08g01264 123 MobiDBLite consensus disorder prediction 1 32 - -
Cca08g01264 123 ProSiteProfiles Ankyrin repeat region circular profile. 69 101 - -
Cca08g01264 123 SMART ANK_2a 36 65 IPR002110 GO:0005515
Cca08g01264 123 SMART ANK_2a 69 98 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01264 Cca-Chr8 37731678 37732188 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g01264 1 105 MAP Kinase Kinase Kinase AT3G58760 49.565 7.17e-32 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01264 - - ccaj:109794064 211.075