Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01244 ATGATGATGATGTTTGATGAGATGGGTTGCAATGATTTGGATATGATATCTGCTCCCCTTGGAGAGGAGGATATTACCGCCCGGCAAACTGAACCAGAGGCGATAGTTGAGGATGATTTTAGTGATGAAGAAATTGGGATGGATGAGCTTGAGCATAGGATGTGGAAGGACAAACTGCTTCACAAGCGATTGAAGGAGCAAAGTAAAGTTAAGGAAGGAGTTGATGCTGTGAAGCAGAGGCAGTCCCAAGAACAGGCCAGGAGGAAAAAGATGTCAAGGGCTCAAGATGGAATCTTGAAGTACATGCTGAAGATGATGGAGGTTTGCAAGGCTCAAGGCTTTGTCTATGGCATAATTCCTGAGAAGGGAAAGCCTGTGACTGGTGCATCTGATAATCTTCGCGAATGGTGGAAGGATAAAGTCCGGTTTGATCGCAATGGTCCTGCTGCCATAGCCAAGTATCAAGCTGATAATGCTATCCCAGGGAAGAATGATGGATGCAACTCCATGGGTCCAACTCCTCACACGCTGCAAGAGCTGCAGGACACAACCTTGGGTTCTCTATTGTCTGCACTCATGCAGCACTGTGACCCCCCTCAGAGGCGGTTTCCGTTGGAGAAGGGCGTTCCTCCACCATGGTGGCCTACAGGGAATGAAGAGTGGTGGCCCCAAATTGGTTTACCTAAAGATCAAGGTCCTCCACCTTACAAGAAGCCTCATGACCTTAAGAAGGCTTGGAAAGTTGGTGTTCTGACTGCTGTTATCAAGCACATGTCTCCTGATATCACCAAAATTCGCAAGCTTGTGAGGCAATCCAAGTGCCTTCAAGATAAAATGACAGCCAAGGAAAGTGCCACCTGGCTTGCAATCATCAATCAGGAGGAGGCCTTGGCAAGAGAGCTTTACCCTGATTATATCCCCCCATTAGCCTCAGGTGGAGGTAGTGGATCTGTGGTCATGAATGATAGCAGTGAGTATGATGTTGAAGGTGGTGTTGATGAGCCTAACTTTGACGTGGAGGACCGGCGACCTGAGAGTCTTCACACATCCAATCTCGCCATGGAGAGAATGAGGGGAGGTCTGCCAGTTCAGCAGCCCTCTTTTTCAATCAAGGGAGAGGCTGTTACAAATTTGGATTTCATGAGGAAGAGGAAGGCCTCTAATGAGTTCAACATGATGGATATGAAAATTTACACATGTGAACAACCTCAGTGCCCTTACAGTCAAGTTCGCCTTGGTTTCCCTGATAGAATTTCTAGGGACAACCATCAATTGATTTGTGCATATAAAGGTAATTCTTCAGATTTTGGGGGTCCAAGTTTTCATGTTAATGAGGTAAAGCCTGTCATATATCCCCAGTCCTTTGTTCAACCCAAATCCACTGCGCAGTCTGTTAATATGGCTCCACCTGTAATTGATCTCACTGGACTTGAAGTTTCAGAAGATGGCCAGAAGATGATCGGTGACCTTATGACTAACTATGATACAAATGTTCAAGGCAACAAGAATGTAAGTTCCTGTAACCGCTTTGCAGCAGAAAATTCAAACTCTCCTCAGCATGGCATGCAGCAGCAACAGAACAACTTCATTTGCGGCCAAGGAATCACTATGGAAGGGAACAACCTCTTTGAAGAAGCTAACATGTCCAATAATCATCACATGTTTGCAAGGGAGGAAGGTCAGTTTGACCGGTTCAAAGCTTTGAATGCACCCTTTGAGACCACTCAGaacaacaacaacaacaacTTTCATTCGATGTTTGGGTCCTTTTGTGATTTGGCATCATTTGATTTTAAGGAGGATATGCAAGGAGTAGGGATGGATGCTCTTCAGAAACAGCCAGATATTTCTATATGGTACCAGTGA 1866 0.4518 MMMMFDEMGCNDLDMISAPLGEEDITARQTEPEAIVEDDFSDEEIGMDELEHRMWKDKLLHKRLKEQSKVKEGVDAVKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAIAKYQADNAIPGKNDGCNSMGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVPPPWWPTGNEEWWPQIGLPKDQGPPPYKKPHDLKKAWKVGVLTAVIKHMSPDITKIRKLVRQSKCLQDKMTAKESATWLAIINQEEALARELYPDYIPPLASGGGSGSVVMNDSSEYDVEGGVDEPNFDVEDRRPESLHTSNLAMERMRGGLPVQQPSFSIKGEAVTNLDFMRKRKASNEFNMMDMKIYTCEQPQCPYSQVRLGFPDRISRDNHQLICAYKGNSSDFGGPSFHVNEVKPVIYPQSFVQPKSTAQSVNMAPPVIDLTGLEVSEDGQKMIGDLMTNYDTNVQGNKNVSSCNRFAAENSNSPQHGMQQQQNNFICGQGITMEGNNLFEEANMSNNHHMFAREEGQFDRFKALNAPFETTQNNNNNNFHSMFGSFCDLASFDFKEDMQGVGMDALQKQPDISIWYQ 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01244 621 Gene3D - 80 157 IPR023278 GO:0003700|GO:0005634
Cca08g01244 621 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 2 620 IPR006957 GO:0005634
Cca08g01244 621 MobiDBLite consensus disorder prediction 71 91 - -
Cca08g01244 621 Gene3D - 172 305 IPR023278 GO:0003700|GO:0005634
Cca08g01244 621 PANTHER ETHYLENE INSENSITIVE 3-LIKE 1 PROTEIN 2 620 - -
Cca08g01244 621 SUPERFAMILY DNA-binding domain of EIN3-like 174 298 IPR023278 GO:0003700|GO:0005634
Cca08g01244 621 Pfam Ethylene insensitive 3 48 295 IPR006957 GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01244 Cca-Chr8 36649553 36652913 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g01244 3 620 EIL Transcription Factor Family AT3G20770 59.042 0.0 678
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Cca08g01244 EIN3 5.7e-129 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01244 K14514 - gmx:100818629 1121.69