Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01224 ATGTGTGTTGCTGAGCCTCAGATCCAGGAGTCTAGCTTCCTTGGATCACCACAAAGAATGCTCAGATCTGAAGAACTTGCGGTAACGATATTGATTGGCTTGGTGCAAACAATTATGTCATCCAACAGTTCTTTGAATGTTGAATTGTCAAAGAAGACGTCTTTTTTGGGTTTGAAACGATGGGTTTTGCTAGGGATAGGTGTTGGTGCATTTATAGTGCTGATTCTTTGTATATTATCCGTATGGGTGATGTTTCGGAGAAAGTCTAGGAGATCTCTGGAGAAGCATTCTATATCCCAAATACCGAATGTCTCAAAAGATATTGATGTTGACAAAGTTGGAGTGCAGAGTTCTCATGTTCAACCAGAAAATGTGCTTATTCCTGTTCATGACAAGGCAAGTGATTACAATTCAGATAACATGTCGCTTCATTTGGGAAAGAGAAAATCCGGTGATCCTGATAATATCAGTCAGTGCAGCTCAATTTATCATCATGAGAGAGGACTTAGTTCATTGTCGGCGGAAGAAGGAAGTTCTGGGAATGCTAAGAAGCAATCTATATCATCTCATGGAGCGCTGGCAACTGCCTCTCCTTTAGTTGGCTTGCCAGAGTTTTCTCATCTTGGGTGGGGCCACTGGTTTACACTTAGGGATCTGGAAATGGCAACCAATCGTTTCTCAACTGAGAACATTATTGGTGAGGGTGGATATGGGATTGTGTACAAGGGCAGACTGGTTAATGAAACTGAGGTTGCAGTGAAGAAGCTTCTTAACAACTTGGGACAAGCTGAGAAAGAATTCAGGGTTGAAGTCGAGGCTATAGGACATGTTAGACATAAGCATCTTGTGCGCCTTCTTGGATATTGTGTAGAAGGAGTTCACAGGTAA 888 0.4212 MCVAEPQIQESSFLGSPQRMLRSEELAVTILIGLVQTIMSSNSSLNVELSKKTSFLGLKRWVLLGIGVGAFIVLILCILSVWVMFRRKSRRSLEKHSISQIPNVSKDIDVDKVGVQSSHVQPENVLIPVHDKASDYNSDNMSLHLGKRKSGDPDNISQCSSIYHHERGLSSLSAEEGSSGNAKKQSISSHGALATASPLVGLPEFSHLGWGHWFTLRDLEMATNRFSTENIIGEGGYGIVYKGRLVNETEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKHLVRLLGYCVEGVHR 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01224 295 Coils Coil 246 266 - -
Cca08g01224 295 Gene3D Phosphorylase Kinase; domain 1 207 295 - -
Cca08g01224 295 ProSiteProfiles Protein kinase domain profile. 226 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca08g01224 295 PANTHER RECEPTOR-LIKE KINASE PLANT 35 295 - -
Cca08g01224 295 SUPERFAMILY Protein kinase-like (PK-like) 210 294 IPR011009 -
Cca08g01224 295 PANTHER OS01G0323000 PROTEIN 35 295 - -
Cca08g01224 295 ProSitePatterns Protein kinases ATP-binding region signature. 232 255 IPR017441 GO:0005524
Cca08g01224 295 Pfam Protein tyrosine and serine/threonine kinase 228 291 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01224 Cca-Chr8 35814862 35816482 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g01224 62 295 Trihelix Transcription Factor Family AT1G23540 30.962 1.98e-22 95.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Cca08g01224 PK_Tyr_Ser-Thr 3.8e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01224 - - ccaj:109791113 511.531