Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01203 ATGGAGTCAAAAAACCCCGCGAGGTTTACGCTGGGAAGCAGTCGTCGCTGGCACGGACGCCGCAACGAGGAAGCGGAGCTTCAGAAGGAGGGAGACGTCGTTGACCAGAGCGTGAGGTTGATGTATTCGACGTTCGAAGGCGATGTGGATGGTATTCGCGAGGTGTTGGAGTCTGGTGTTAGTGTCAATTTTAGGAATATTGATTATCGCATTGCTCTTCATGTTGCCGCCTGA 234 0.5256 MESKNPARFTLGSSRRWHGRRNEEAELQKEGDVVDQSVRLMYSTFEGDVDGIREVLESGVSVNFRNIDYRIALHVAA 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01203 77 Gene3D - 29 77 IPR036770 -
Cca08g01203 77 SUPERFAMILY Ankyrin repeat 40 77 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01203 Cca-Chr8 35033809 35034537 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g01203 1 77 MAP Kinase Kinase Kinase AT3G58760 39.773 1.49e-12 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01203 - - ccaj:109794064 112.849