Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01159 ATGGGATCTCAGGTAGAGACAGTACAAGAGCCAAATACTAGTACTGCCCCTTTGGCTAGGCAAGGGTCCTTGTATAATCTAACCCTTGATGAGGTGCAAAGCCAGCTTGGGAATTTGGGGAAGCCTCTTGGCAGCATGAATCTTGACGAGTTACTGAAGAGTGTGTGGAGTGCTGAAGCTGGTGGTGAGGCCTCTGGCTTTGACTTtggtgttggtggtggtggtgatgCTAACATGCATCATGATGGCCATGTTGCTTCTCTGAATCCACAGGGGAGCCTAACTTCGTCTAGGGATCTCAGCAAGATAACAGTTGATGAGGTTTGGAGAGATATGCAACTGAAGAAGGATACTACTAATAGGGATAGGAAAACACAGGAAAGACAGGCTACACTTGGTGAGATGACTCTGGAGGACTTCTTGGTGAAGGCTGGAGTGGTTGCTGAATCTTTTCCTACCAAGGATTCAAATGGGGCTACCTCACAACATGGCCAATGGATGCAATATCAGCAGAATATGATGGGGGGTTATGTGGCTGGCCATGCCATTCAGCAGCCTTTCCAGGTTGCCATGAATCTAGTTTTGGATGCGGCTTACACCAAGACGCCGAGTTCTTTGGTGGGCGGTTTGTCGGATACACAAACTCCAGGTCGGAAAAGGGTTGCCTCTGGTGATGTGGTTGAGAAAACTGTGGAGAGGAGGCAGAAGAGGATGATCAAAAATAGGGAATCTGCTGCAAGGTCACGGGCAAGGAAACAGGCATACACACAAGAACTGGAGAATAAAGTTTCGCAATTAGAAGAGGAGAATGAAAGGCTTAGAAGACTGAATGAGATGCAGAAGGCGTTGCCATCTGTGCCACCACCTGAGCTTAAGCATCAGTTACGCAGAACTAGTTCAGCCATCTTTTGA 912 0.4649 MGSQVETVQEPNTSTAPLARQGSLYNLTLDEVQSQLGNLGKPLGSMNLDELLKSVWSAEAGGEASGFDFGVGGGGDANMHHDGHVASLNPQGSLTSSRDLSKITVDEVWRDMQLKKDTTNRDRKTQERQATLGEMTLEDFLVKAGVVAESFPTKDSNGATSQHGQWMQYQQNMMGGYVAGHAIQQPFQVAMNLVLDAAYTKTPSSLVGGLSDTQTPGRKRVASGDVVEKTVERRQKRMIKNRESAARSRARKQAYTQELENKVSQLEEENERLRRLNEMQKALPSVPPPELKHQLRRTSSAIF 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01159 303 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 236 251 IPR004827 GO:0003700|GO:0006355
Cca08g01159 303 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 231 275 IPR004827 GO:0003700|GO:0006355
Cca08g01159 303 Pfam bZIP transcription factor 233 277 IPR004827 GO:0003700|GO:0006355
Cca08g01159 303 PANTHER BZIP TRANSCRIPTION FACTOR 2 301 - -
Cca08g01159 303 CDD bZIP_plant_BZIP46 233 282 - -
Cca08g01159 303 Gene3D - 231 284 - -
Cca08g01159 303 SMART brlzneu 229 297 IPR004827 GO:0003700|GO:0006355
Cca08g01159 303 MobiDBLite consensus disorder prediction 283 303 - -
Cca08g01159 303 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 2 301 IPR043452 GO:0003700|GO:0045893
Cca08g01159 303 Coils Coil 249 283 - -
Cca08g01159 303 SUPERFAMILY Leucine zipper domain 233 280 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01159 Cca-Chr8 33028744 33032340 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g01159 18 303 bZIP Transcription Factor Family AT3G56850 57.143 8.77e-99 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Cca08g01159 bZIP_1 7.6e-14 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01159 K14432 - gmx:100170741 431.409