Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01149 ATGGATCATTACAAGGTCCTCGGCTTGCACCGAACCGCGACCAAGGAAGAGATCAAAGCAGCGTTCAAGAAACTCGCGTTCCAGTTCCACCCCGACAAGCATTCGCAATCGCCCAAAGCCGTTAGGGAAAACGCCACAATTCGATTCAAGCAGGTCTCCGAGGCCTACGAGGTCCTCATGGACGATCGCAAGCGCGCCGACTTCAATTTCCGCCGGGGCTCCGCCGCCGGCGCCGGAAACAACTACTATTCGCAGTACAGCTACGGCTACGGCAGGGGTGGAGGCAGTTACGAGTATAAACCTAGGTCTGGTGGCAGTGGCGGTGGCTTCGCGTCCAAATTTGAACTCGCGCTTCGGATTTTGACGTCGCGGTCTTCGCTTCTCAATCTCGGTTTCGCAGCGGCTATATTAGGTGGGATAGTTGTCATTGATTCAAGCGGAGAATCCTTGTGGAGAGTGCAAAATTCTGGGAAATCTTTTGAAGAAGCCATGAAGTCCATTGAGAAAGCCAAAGCGTATAGAGAAGATAACTTGAAGGAACGTCCTTGA 549 0.5264 MDHYKVLGLHRTATKEEIKAAFKKLAFQFHPDKHSQSPKAVRENATIRFKQVSEAYEVLMDDRKRADFNFRRGSAAGAGNNYYSQYSYGYGRGGGSYEYKPRSGGSGGGFASKFELALRILTSRSSLLNLGFAAAILGGIVVIDSSGESLWRVQNSGKSFEEAMKSIEKAKAYREDNLKERP 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01149 182 Gene3D DnaJ domain 1 90 IPR036869 -
Cca08g01149 182 CDD DnaJ 2 61 IPR001623 -
Cca08g01149 182 ProSiteProfiles dnaJ domain profile. 2 87 IPR001623 -
Cca08g01149 182 SMART dnaj_3 1 64 IPR001623 -
Cca08g01149 182 ProSitePatterns Nt-dnaJ domain signature. 49 68 IPR018253 -
Cca08g01149 182 PANTHER CO-CHAPERONE PROTEIN DJLA 1 165 - -
Cca08g01149 182 PANTHER CHAPERONE PROTEIN DNAJ 72 1 165 - -
Cca08g01149 182 PRINTS DnaJ domain signature 4 22 IPR001623 -
Cca08g01149 182 PRINTS DnaJ domain signature 22 37 IPR001623 -
Cca08g01149 182 PRINTS DnaJ domain signature 44 64 IPR001623 -
Cca08g01149 182 SUPERFAMILY Chaperone J-domain 1 97 IPR036869 -
Cca08g01149 182 Pfam DnaJ domain 2 69 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01149 Cca-Chr8 32393014 32396340 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g01149 3 72 C2H2 Transcription Factor Family AT1G74250 37.143 9.99e-11 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01149 - - gmx:100782769 290.041