Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01075 ATGGGTTATTCCCAATTCTATGTTGTTTTGCTTTTGTCCATCTTTGTGGGAATATGCTTAGCTTCCCCAATAGAGGACCAAAAGAGGGATAGGGTTACCGAGCTGCCAGGACAACCAAACAATGTGAAATTTGCTCAGTATTCTGGCTATGTAACTGTTAATGAGCAAGCTGGGAGAGCATTGTTTTACTGGCTGGTTGAGACACCAGCTAGTGATACTGATGGACCAAGTTCAAGGCCACTGGTGTTGTGGCTTAATGGTGGCCCTGGATGCTCCTCTATTGCCTATGGAGCAGCTGAAGAAATCGGCCCTTTTCGTGTTAGTCCTGATGGGAGTTCACTTTACTTGAATCCTTATGCTTGGAACAATTTGGCAAATCTACTCTTCCTTGAGTCTCCTGCTGGTGTTGGTTTTTCATATTCTAACACAACATCAGATCTGTATACAGCAGGTGACCAAAGAACAGCTGAAGATGCATATACTTTCCTTGTGAATTGGTTTGAAAGATTTCCTCAATATAAGCATAGGGATTTCTACATTGCTGGTGAAAGTTATGCAGGTCACTATGTTCCTCAATTGGCTCAAATTGTTAACCAGAAAAATAAAGGAATCAAGGATCCAGATATAAATTTGAAGGGGTTTCTGGTTGGGAATGCTGTCACTGATGATTACCATGATTACATTGGTACATTTGAGTACTGGTGGGTCCACGGTTTGATTTCAGACGCCACATATAGGATGCTGGGAATTGCCTGTGACTTCGGGTCCTCTCAGCATCCATCAGACCAATGCTTAGAAACTCTCAAACTTGCAACAGTGGAGCAAGGAAACATTGATCCATATAGCATTTATACACAGACATGCAATGATACAGCATCACTCAAACACAACTTAGGGGGTCGCTACCCATGGATGTCTCGAGCATATGATCCCTGTACTGAGAGGTACTCTGACTTGTATTTTAATAATCCAGAAGTTCAGAAGGCACTCCATGCCAATGTGACTGGCATTTCTTATTCATGGAAGACATGCAGTGATATTGTTGGGGTTGAGGATTATTGGGCTGATTCTCCGCTATCTATGCTTCCAATATATCAAGAACTTATTGAAGCTGGTCTTAGGATATGGGTATTCAGTGGAGACACTGATTCAGTGGTTCCTTTAACCGCGACTCGGTACTCAATTGATGCCCTGAACCTACCCACCATCATCAACTGGTACCCGTGGTATGATTATGGCGAGGTTGGTGGCTGGAGTCAAGTGTATAAGGGGCTTATATTGGTTACAGTAAGAGGGGCAGGGCATGAGGTTCCACTTCATAAACCTCGCCAAGCACTTATTCTTTTCGGGTCATTCTTGGAGAACAAGTACATGTAG 1377 0.4321 MGYSQFYVVLLLSIFVGICLASPIEDQKRDRVTELPGQPNNVKFAQYSGYVTVNEQAGRALFYWLVETPASDTDGPSSRPLVLWLNGGPGCSSIAYGAAEEIGPFRVSPDGSSLYLNPYAWNNLANLLFLESPAGVGFSYSNTTSDLYTAGDQRTAEDAYTFLVNWFERFPQYKHRDFYIAGESYAGHYVPQLAQIVNQKNKGIKDPDINLKGFLVGNAVTDDYHDYIGTFEYWWVHGLISDATYRMLGIACDFGSSQHPSDQCLETLKLATVEQGNIDPYSIYTQTCNDTASLKHNLGGRYPWMSRAYDPCTERYSDLYFNNPEVQKALHANVTGISYSWKTCSDIVGVEDYWADSPLSMLPIYQELIEAGLRIWVFSGDTDSVVPLTATRYSIDALNLPTIINWYPWYDYGEVGGWSQVYKGLILVTVRGAGHEVPLHKPRQALILFGSFLENKYM 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01075 458 Gene3D - 312 348 - -
Cca08g01075 458 ProSitePatterns Serine carboxypeptidases, histidine active site. 425 442 IPR033124 GO:0004185
Cca08g01075 458 Gene3D alpha/beta hydrolase 26 290 IPR029058 -
Cca08g01075 458 Gene3D - 361 454 - -
Cca08g01075 458 ProSitePatterns Serine carboxypeptidases, serine active site. 180 187 IPR018202 GO:0004185
Cca08g01075 458 SUPERFAMILY alpha/beta-Hydrolases 27 457 IPR029058 -
Cca08g01075 458 PANTHER CARBOXYPEPTIDASE 13 457 - -
Cca08g01075 458 Pfam Serine carboxypeptidase 36 455 IPR001563 GO:0004185|GO:0006508
Cca08g01075 458 PRINTS Carboxypeptidase C serine protease (S10) family signature 117 129 IPR001563 GO:0004185|GO:0006508
Cca08g01075 458 PRINTS Carboxypeptidase C serine protease (S10) family signature 130 140 IPR001563 GO:0004185|GO:0006508
Cca08g01075 458 PRINTS Carboxypeptidase C serine protease (S10) family signature 166 191 IPR001563 GO:0004185|GO:0006508
Cca08g01075 458 PRINTS Carboxypeptidase C serine protease (S10) family signature 425 438 IPR001563 GO:0004185|GO:0006508
Cca08g01075 458 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 13 457 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01075 Cca-Chr8 27923677 27940206 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g01075 322 456 Calmodulin-binding Proteins AT2G22960 27.941 9.21e-12 62.0