Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01073 ATGGCCGAAGACAAAATTTATGAACGATCGCTTGAGGAAACACCAACCTGGGCGGTTGCAGTTGTATGTTTTGTGCTGCTTGCTATTTCAATCATCATAGAACATATTATTCATGCGATTGGAAAGTGGTTCAAAAAGAAACACAAAAGTGCTCTTTATGAATCGTTGGAAAAGGTCAAAGGAGAGCTTATGATGCTAGGATTCATATCCATGCTCCTAACTGTGTTCGAAGGTCCACTTTCTAAGATCTGCATATCGCAAAATGTTGCATCCACGTGGCATCCGTGTCACAAACCAAAATCTGACACTGGCACCAATGGTAGGAAACTCCTCCAATATTTGGAACTCATATCTCGGCGTGTTCTAGCTGCGAAAGCAAATGACAAATGTGCTGAAAAGGCAAGTATCAGAAATTTTACAGGAAGAGTTGCTTTTGTTTCGGCATATGGGATTCACCAGCTCCATATATTCATATTTGTTCTAGCTGTTTTTCATATCCTACAATGCATTATAACACTAGCTTTGGGAAGAACTAAGATGAGACGCTGGAAGAAGTGGGAAGATGAAACAAAGACAATTGAATATCAATTCTATAATGATCCTGAAAGGTTCAGGTTCGCAAAGGACACAACATTTGGACAAAGGCACTTAAATACGTGGAGTCACTCATCAATTTCATTATGGATAGTTAGCTTCTTCAGGCAATTCTTTGGATCTGTTAAGAAAGTTGACTATTTCGCATTACGTCATGGATTTATTACCGCACATCTGGCACCAGGAAGTGATGCAAGATTTGATTTCCAGAAGTATATCAAAAGATCACTCGATGAGGATTTTAAAGTTGTCGTGGGAATAAGGTATGAACATGTTCTGTTGCGCTTTACTTTGATAATCTTATTAGTGGGTGCTAAGCTACAAAAGATCATAACAAAAATGGGACTGAGGATTCAAGACAGAGGGGAAGTAGTTAAGGGTGCACCTGTGGTTGAGCCAGGAGATGACCTGTTCTGGTTCAACCGTCCACGCCTCCTTCTCTTCATCATTCACCTTGTTCTCTTTCAGAATGCCTTTCAATTAGCACATTTTGCATGGAGTACATATGAATTCTCCATAAACTCTTGCTTCCACAGATCAACAGCAGATATTGTGATCAGACTTACAATGGGGGTTGTCATACAAGTTCTATGCAGCTATGTGACCTTGCCTCTTTATGCTCTAGTCACACAGATGGGTTCAACCTTGAAACCCACCATTTTCAATGAAAGAGTAGCAGCAGCATTGAAGAAGTGGCACCATGCTGCCAAAAACCATGTGAAAGACAGCAAGCACTGCGAGGCTAATAGTACCACAGCATTCTGCAGCAGGTCATCAACCCCAACATTTGGCATGTCCCCTGTTCACCTGCTAAACAGACACCTTGCTGGCAAAAGTGATAGTCCACAAACTTCTCCAAGAACATCCAACTACGAAAATGAACAATTTGATTTTGAAAATGAACCTTCCACAAGCACCCATTCAGGAACAGAGGAGACCCCAATGCAAGTTTTTGGGCCACCTTCGACAACAGAATTGCCTATTAGCACTAAGCTTGAAGTCCACGTTAGTTCATCAGATTTTTCTTTTGAGAAGTAA 1632 0.4099 MAEDKIYERSLEETPTWAVAVVCFVLLAISIIIEHIIHAIGKWFKKKHKSALYESLEKVKGELMMLGFISMLLTVFEGPLSKICISQNVASTWHPCHKPKSDTGTNGRKLLQYLELISRRVLAAKANDKCAEKASIRNFTGRVAFVSAYGIHQLHIFIFVLAVFHILQCIITLALGRTKMRRWKKWEDETKTIEYQFYNDPERFRFAKDTTFGQRHLNTWSHSSISLWIVSFFRQFFGSVKKVDYFALRHGFITAHLAPGSDARFDFQKYIKRSLDEDFKVVVGIRYEHVLLRFTLIILLVGAKLQKIITKMGLRIQDRGEVVKGAPVVEPGDDLFWFNRPRLLLFIIHLVLFQNAFQLAHFAWSTYEFSINSCFHRSTADIVIRLTMGVVIQVLCSYVTLPLYALVTQMGSTLKPTIFNERVAAALKKWHHAAKNHVKDSKHCEANSTTAFCSRSSTPTFGMSPVHLLNRHLAGKSDSPQTSPRTSNYENEQFDFENEPSTSTHSGTEETPMQVFGPPSTTELPISTKLEVHVSSSDFSFEK 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01073 543 MobiDBLite consensus disorder prediction 475 529 - -
Cca08g01073 543 MobiDBLite consensus disorder prediction 474 529 - -
Cca08g01073 543 PANTHER MLO-LIKE PROTEIN 6 540 - -
Cca08g01073 543 Pfam Mlo family 8 286 IPR004326 GO:0006952|GO:0016021
Cca08g01073 543 Pfam Mlo family 296 471 IPR004326 GO:0006952|GO:0016021
Cca08g01073 543 PANTHER MLO-LIKE PROTEIN 1 6 540 IPR004326 GO:0006952|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01073 Cca-Chr8 27731515 27743024 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g01073 6 543 MLO family AT2G39200 58.803 0.0 655
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01073 K08472 - gmx:100819749 893.649
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02038 02 40420524 40425584 Cca08g01073 08 27731515 27743024 PCT