Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01070 ATGGTCGAAGAAAAGCGAGTTTATGAACGAACACTAGAGGAAACACCAACATGGGCTGTTGCAGTCGTGTGTTTTGTGTTGCTTGCTATTTCAATCCTCTTAGAACATATTATTCATGCGATCGGAAAGTGGTTCAAAAGGAAAAACAAGAATGCTCTTTTTGAAGCGTTGGAAAAGGTTAAAGGAGAGCTTATGGTGCTAGGATTCATATCCTTGATGCTAACTGTGTTGCAAGATCCAATTTCGAAGATCTGTGTGTCCCCAAAGGTTGCATCTAGTTGGCATCCTTGTGCCAACCCAAAACCATTTGGTACAACTGAGGATAAATCTGGTGAGGATGAATCTGGTGATGATGACGTTGAGATCAATTCTAGGAAACTCCTCCAATATTATTATGAAACCATACCAAGGCGTGTTCTGGCTACAAAAGGATATGACAAATGCTTTGCAAAGGGAAAAGTGGCTTTTGTTTCAGCATATGGGATTCACCAGCTCCATATGTTTATCTTTGTGCTAGCTATTTTCCATATCTTACAATGCATTGTGACACTGACTTTGGGAAGAACCAAGATGAGAAAATGGAGGGCATGGGAAAATGAAACGAAAACCATTGAATATCAATTTTATAATGATCCTGAGAGGTTCAGGTTTGCAAGGGATACGACATTTGGAAGAAGGCACTTGAACTCTTGGAGTCAGTCAGCATTTTCCTTGGCTATAGTTAGTTTCTTTCGACAATTCATTGGATCTGTCAATAAAGTTGACTATTTAACATTACGCCATGGATTTATCACTGCGCATCTGGCACCAGGAAGTGATGCAAGATTTGATTTTCAGAAGTATATCCAGAGATCACTTGAGGAAGATTTTAAAGTTGTAGTGGGAATAAGCCCAATCATATGGTTCTTTGCGGTGCTATTCCTGTTGACTAATACTCATGGGTGGTACTCTTATTATTGGCTTCCATTTATGCCATTAATTATAATCTTATTAGTTGGTGCTAAGCTACAAATGATCATAACAAAGATGGGACTGAGGATTGCAGACAGAGGGGAAGTTGTGAAAGGTGCACCTGTGGTTGAGCCAGGAGATGACCTGTTCTGGTTTAACCGTCCACGCCTCCTCCTCTTCTTGATTCATCTTGTGCTCTTTCAGAATGCTTTTCAACTGGCATTCTTTTCTTGGAGTACTGTAAGTTTTTCTATCTTGATCAAGTTTTCCTAG 1224 0.3987 MVEEKRVYERTLEETPTWAVAVVCFVLLAISILLEHIIHAIGKWFKRKNKNALFEALEKVKGELMVLGFISLMLTVLQDPISKICVSPKVASSWHPCANPKPFGTTEDKSGEDESGDDDVEINSRKLLQYYYETIPRRVLATKGYDKCFAKGKVAFVSAYGIHQLHMFIFVLAIFHILQCIVTLTLGRTKMRKWRAWENETKTIEYQFYNDPERFRFARDTTFGRRHLNSWSQSAFSLAIVSFFRQFIGSVNKVDYLTLRHGFITAHLAPGSDARFDFQKYIQRSLEEDFKVVVGISPIIWFFAVLFLLTNTHGWYSYYWLPFMPLIIILLVGAKLQMIITKMGLRIADRGEVVKGAPVVEPGDDLFWFNRPRLLLFLIHLVLFQNAFQLAFFSWSTVSFSILIKFS 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01070 407 PANTHER MLO-LIKE PROTEIN 1 8 402 IPR004326 GO:0006952|GO:0016021
Cca08g01070 407 PANTHER MLO-LIKE PROTEIN 8 402 - -
Cca08g01070 407 Pfam Mlo family 9 402 IPR004326 GO:0006952|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01070 Cca-Chr8 27641658 27648914 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g01070 7 402 MLO family AT2G39200 69.674 0.0 578
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01070 K08472 - gmx:100775372 702.205