Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01058 ATGGAGAAGAACCTTGCCGAACACTCTGGCAGTTTCGCTCGCAAAGCCGACGACGACACCGGCAACGCCACTCATTCGCCGGTGCCGGAGTCCGCCGATAATTTCGATGCCAAACCGGACACCGGCGAAACCGAGAAAGCTGCGGATTCAGATCACGTTCATGGagaacaagaagccaaggagaataagaatgagaatgagaatgagaaggagaaagagaaggaggaaaagaaggaagaagaaaaagaagaaaaagaagaaaaagaagaagaaAACGTGGAGGCTCAACCGGAATCTCCCCCTCCGAGTCTCGAGAAGGTTTCAGAAGACATCGACCAATTCCTCGTGACTCTGCAAAACAACAACAAAGACGACACCAAATTGGAGATCCCTAAATGTGTAATCACATTCTTGGATCTCGTGGAGCAGAAGATAACAAAGTACGACACCGCCGAGGCCAAATGGGGAGAATCAGCGGAAGAAGATTCGTTGTTTCTGGAATCCGTGAATCGCGTTTCGAATCTGATGAAACATTTAACGGAGTATATCCAATCTCATCGCGAGAAAGAGCAAGAGGACGAGGAAAAGGTGAAGGTAGACTTGATGATAAACGGCATCGGCTCGATTCAGCAGCGTGCGATGTCGTTTCTGGAGGAGGAGTTCCGCTCCCTAATGGAAGAATCTAGAAACCCGAACAAAGCAGACCCGAAAGGAAAGCAACACGTGGCGGAAGCGTTGGAGTCCGAGACTCCAACTGAAACGGTTATGGATTTCCCGGGTTTCGCGGAGGAAACGGTTACGAAGCTACGCCAAATCGCCAAGGAAATGACAGCAGGCGGTTACGAAAATGAGTGCTGCCAGGTTTACGCAGTTTCGCGGAGGCACGCGTTCGAAGAGGGGTTGTACAAGATTTTAGGTTACGAGAAGCTCAGCATCGACGAGGCGCAGAGAATGCCGTGGGAGACACTGGAGCGGGAGATTCCCACGTGGATCAACACGTGGAAGGAATGCACCTCGGTGTGGTTCCCCGGCGAGCGGAAGCTCGCCGAGGCGGTGTTCGCGGAGGAGACGACGGCGGACTCCGCGGCGTGCCTCTACGGCAACCTCTTCCGCAGCATCGCGATTCAGCTGGTGAACTTCGCGGAGAGCGTGGCCATGACGAAGCGCGCGGGAGAGAAACTCTTCAAGCTCCTGGACATGTACGAGACCTTGCGAGACGCGATTCCGAGCATGGAGAATCTCTTCCCCGACGACATGGCCGCGGAAGTGAAGACCGAAACGACGTCGGCGAAGTGCCGCCTCGGCGAGGGAGCGGTGTTGATATTCTGCGACCTGGAGAATTCGATCAAGTCGGAGACCGGGAGAACTCCGGTGGCCGGCGGCGCGGTGCACCCGCTCACGCGCTACATCATGAACTACCTGAGGCTAGCGTGTGAATACAAAGACACGTTGGAGGAGGTGTTCAAAGAACACTCCAAAATGGAGCGCGCGGATTCAACAAGCAGGCCTCACTACGAGAGAGAGGAAGACAAACACAAGAACAATGCACAGAAAGATAACGTGTCACCTTTCGCGGCGCAGTTGATGAGGGTGATGGAGCTTCTGGACTCGAACCTCGAAGGAAAGGCGAAGCTGTACAAAGAAGTTGCATTAAGCTGCATTTTCATGATGAACAACGGAAGGTACATAGTTCAGAAAATAAAAGGTTCTGCGGAGATCTACGAAGTGATGGGGGAAACGTGGTGTCGTAAGAGATCGACGGAGCTGAGGACCTACCACAAGACTTACCAGTTAGAGACGTGGAGTAAGATTCTGAGTTGTCTGAGTCTGAAGGGTTTGAATGATAACGGGAAGGTGCAGAAGCCGGTGCTGAAGGAACGGTTCAAGAGCTTCAACGCGTTGTTTGAGGAGATCCACAAGACGCAGAGCGCGTGGGTGGTGAGCGACGAACAGCTTCAATCGGAACTTAGGGCTTCAATTTCTACGCTGGTGATTCCTGCGTACAGGTCCTTCTTGGGTAGGTTTTCGCAGTACTTGGATCCGGGGAGACAAACGGAGAAGTATATTAAGTACCAGGGTGAGGATGTAGAGACTTGCATTGACGAGTTGTTCGATGGGAACCCTCACGGGCGCCGCTAG 2139 0.5068 MEKNLAEHSGSFARKADDDTGNATHSPVPESADNFDAKPDTGETEKAADSDHVHGEQEAKENKNENENEKEKEKEEKKEEEKEEKEEKEEENVEAQPESPPPSLEKVSEDIDQFLVTLQNNNKDDTKLEIPKCVITFLDLVEQKITKYDTAEAKWGESAEEDSLFLESVNRVSNLMKHLTEYIQSHREKEQEDEEKVKVDLMINGIGSIQQRAMSFLEEEFRSLMEESRNPNKADPKGKQHVAEALESETPTETVMDFPGFAEETVTKLRQIAKEMTAGGYENECCQVYAVSRRHAFEEGLYKILGYEKLSIDEAQRMPWETLEREIPTWINTWKECTSVWFPGERKLAEAVFAEETTADSAACLYGNLFRSIAIQLVNFAESVAMTKRAGEKLFKLLDMYETLRDAIPSMENLFPDDMAAEVKTETTSAKCRLGEGAVLIFCDLENSIKSETGRTPVAGGAVHPLTRYIMNYLRLACEYKDTLEEVFKEHSKMERADSTSRPHYEREEDKHKNNAQKDNVSPFAAQLMRVMELLDSNLEGKAKLYKEVALSCIFMMNNGRYIVQKIKGSAEIYEVMGETWCRKRSTELRTYHKTYQLETWSKILSCLSLKGLNDNGKVQKPVLKERFKSFNALFEEIHKTQSAWVVSDEQLQSELRASISTLVIPAYRSFLGRFSQYLDPGRQTEKYIKYQGEDVETCIDELFDGNPHGRR 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01058 712 MobiDBLite consensus disorder prediction 226 250 - -
Cca08g01058 712 MobiDBLite consensus disorder prediction 36 84 - -
Cca08g01058 712 SUPERFAMILY Cullin repeat-like 159 705 IPR016159 -
Cca08g01058 712 Coils Coil 53 98 - -
Cca08g01058 712 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 76 712 - -
Cca08g01058 712 Gene3D Exocyst complex component Exo70 144 712 - -
Cca08g01058 712 MobiDBLite consensus disorder prediction 1 105 - -
Cca08g01058 712 MobiDBLite consensus disorder prediction 226 246 - -
Cca08g01058 712 MobiDBLite consensus disorder prediction 1 21 - -
Cca08g01058 712 PANTHER EXOCYST COMPLEX PROTEIN EXO70 76 712 IPR004140 GO:0000145|GO:0006887
Cca08g01058 712 MobiDBLite consensus disorder prediction 491 519 - -
Cca08g01058 712 MobiDBLite consensus disorder prediction 491 517 - -
Cca08g01058 712 Pfam Exo70 exocyst complex subunit 330 702 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01058 Cca-Chr8 27305090 27307701 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g01058 103 707 EXO70 exocyst subunit family AT5G13990 53.033 0.0 651
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01058 K07195 - gmx:100819960 981.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00789 07 12634207 12636722 Cca08g01058 08 27305090 27307701 PCT