Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01045 ATGGGTTCATCGGAGTCAGAAAGCATGGGGCGGTATTCTCTGATTCCGAGTTGCCTCTATTCGTCTCCCTTGGCGCAGAAGCAGAAGATGATGGAGGAGTCGAGTTTGGTGATTCATTCTCCGAGTGAGAAGCGCAGCATAGAGATGTTTTCGCCTGCTTTCTACACTGCTTGCACCGTTGGTGGAACCCTCAGCTGTGGCCTCACCCACACCGCCATCACGCCTCTTGACGTTGTCAAATGTAACATACAGATTGACCCTGTGAAGTACAAGAACACCAGCACTGGATTTGGCCTCATACTAAAGGAGCAGGGAGTGAGGGGCTTGTTCCGTGGGTGGGCACCGACCCTTGTTGGTTACAGCGCACAGGGTGCCTTCAAATATGGACTCTATGAGTACTTCAAGAAGTACTATTCTGACATAGCTGGTCCAGAGTATGCAACAAAGTACAAGACATTGATTTACCTAGCTGGTTCGGCTTCTTCTGAGTTAATTGCAGATGTTGCTCTTTGCCCATTTGAGGCTGTTAAGGTTAGAGTTCAAACTCAGCCTGGTTTTGCTAGAGGCCTGTCTGATGGACTACCAAAATTGGTCAGAACTGAAGGAGTCTCAGGGTTGTACAAGGGAATTATGCCTCTTTGGGGAAGACAGGTTCCATATACAATGATGAAGTTTGCTTCTTATGAAAATATAGTTGAGATGATCTATAAGCATGCCATCCCCAGACCAAAACATGAATGCAGCAATTCCCTGCAACTAGGAGTGAGCATTGTCGGTGGATACATGGCTGGTATATTATGTGCCGTTGTTTCTCATCCTGCTGATAACCTTGTTTCTTTCCTGAACAATTCCAAAGGGGCAACGGTTGGTGATGCTGTGAAGAAGCTTGGATTATGGGGTCTGTGTACCCGTGGTCTTCCTCTTCGTATTCTTATGATTGGAACTCTCACTGGAGCACAATGGGGAATATATGATTCATTCAAAGTTTTTGTGGGGCTGTAA 1002 0.4651 MGSSESESMGRYSLIPSCLYSSPLAQKQKMMEESSLVIHSPSEKRSIEMFSPAFYTACTVGGTLSCGLTHTAITPLDVVKCNIQIDPVKYKNTSTGFGLILKEQGVRGLFRGWAPTLVGYSAQGAFKYGLYEYFKKYYSDIAGPEYATKYKTLIYLAGSASSELIADVALCPFEAVKVRVQTQPGFARGLSDGLPKLVRTEGVSGLYKGIMPLWGRQVPYTMMKFASYENIVEMIYKHAIPRPKHECSNSLQLGVSIVGGYMAGILCAVVSHPADNLVSFLNNSKGATVGDAVKKLGLWGLCTRGLPLRILMIGTLTGAQWGIYDSFKVFVGL 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01045 333 Gene3D Mitochondrial carrier domain 54 331 IPR023395 -
Cca08g01045 333 PANTHER PHOSPHATE CARRIER PROTEIN 27 333 - -
Cca08g01045 333 Pfam Mitochondrial carrier protein 153 238 IPR018108 -
Cca08g01045 333 Pfam Mitochondrial carrier protein 56 139 IPR018108 -
Cca08g01045 333 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 27 333 IPR044677 GO:0005315|GO:1990547
Cca08g01045 333 ProSiteProfiles Solute carrier (Solcar) repeat profile. 150 234 IPR018108 -
Cca08g01045 333 SUPERFAMILY Mitochondrial carrier 56 325 IPR023395 -
Cca08g01045 333 ProSiteProfiles Solute carrier (Solcar) repeat profile. 53 137 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01045 Cca-Chr8 26598575 26603929 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g01045 30 333 Chloroplast and Mitochondria Gene Families AT5G14040 75.738 0.0 503
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01045 K15102 - gmx:100804257 594.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00760 07 11853044 11857168 Cca08g01045 08 26598575 26603929 PCT