Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00992 ATGCATGGACAAACCAATACTGGCAACAATAAAATTGTATCAACCACAGAAGCAACAGGCAGAATGTCAGAAGCAAGTGGAATTCAAATGAAACATTTAAACATAGGCCTCCAGACAAACAAAAATTCAGAAATAAATGAGGCGTTACATATGCAAATTGAAGTACAGAGAAGACTACATGAGCAGCTTGAGCAGGTACAGCGACACTTACAATTAAGGATAGAGGCACAGGGGAAGTACCTCCAGGCAGTGTTGGAAAAAGCACAAGAGACACTAGGGAGACAAAATCTAGGTGCTGAGGGGGTTGAAGCTGCCAAGGTTCAACTATCCGAACTTGCATCCAGAGTGTCCTCTCAATGCCTTGACTCTAAATATTCAGAACTGAAAGAACTGCAGGCTCTGTGGCCTCAGCAATCACAAGAAGGCCAAGTCACTGATTGTTCAATTGGTAGTTTCTTAACCTATGATGAGGAATCTCAAAGAGATAGAGAAACACACAACATTGGCCTGAATTTGAGAGCCTATAATAATGGCCCTCCATTTGTAGTTTCAAAAGAGTGTGTGGAAGAGCCTATGCACTTAAAGTCTGATCTCACACTGAGTGAAGAAGTGAAGAAGAATATGATGTTTCTTTCCTCATCAAGAGATGATAAAGTAGTGAAGGGAAATTTCTTACCAGAAAGGTCCTCAAACCTCTTATCCATGAACGTAGGAGTTCATGAAGAAGAAAAAATTGGGAGATCAATTCTTTCAAAGGAAGAAAACTGGAAGGGAAGAGAGAACACTGAAACTGGGAGAATGCCAATTAAACTAAACCATGAGAAGATTTCTCAAGATTATAGACTTGCCAACTTTGAAGTGAAACTGGACTTGAATTCACATGATGATAATGATGCTTCTTCTCACTGCCAACAGTTTGATTTGAATGGATTTAGTTGGAATTGCTAG 948 0.3987 MHGQTNTGNNKIVSTTEATGRMSEASGIQMKHLNIGLQTNKNSEINEALHMQIEVQRRLHEQLEQVQRHLQLRIEAQGKYLQAVLEKAQETLGRQNLGAEGVEAAKVQLSELASRVSSQCLDSKYSELKELQALWPQQSQEGQVTDCSIGSFLTYDEESQRDRETHNIGLNLRAYNNGPPFVVSKECVEEPMHLKSDLTLSEEVKKNMMFLSSSRDDKVVKGNFLPERSSNLLSMNVGVHEEEKIGRSILSKEENWKGRENTETGRMPIKLNHEKISQDYRLANFEVKLDLNSHDDNDASSHCQQFDLNGFSWNC 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00992 315 Pfam MYB-CC type transfactor, LHEQLE motif 44 91 IPR025756 -
Cca08g00992 315 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 1 314 IPR044848 GO:0003700
Cca08g00992 315 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 1 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00992 Cca-Chr8 23948218 23951809 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g00992 1 314 G2-like Transcription Factor Family AT3G04030 46.667 4.69e-71 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00992 - - gmx:100786282 523.857