Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00969 ATGGATTTCACAGCGGAGAAGAAGGACGCAGAGAACAACACCGCCAATAACCCCGAAAACGTTCACCAATCGTTAGATTCTTCTCAATTGGCATCGGCACTTGATTCCAGCAACACCAACAAAGAAACCGAAGAACGACAAGCCCGTGAACTCAAAGCCGGTCTTCACCCCCTAAAGAACAAATTTGTCTTTTGGTACACACGTCGTACACCTGGAGTCCGAAATCAAACATCATACGAGGACAACATAAAGAAAATCGTTGATTTTAGTACGGTTGAAGGATTTTGGGTCTGCTATTGCCATCTTGCTCGCCCTTCTTCTTTGCCCAGTCCAACAGATTTGCACCTTTTCAAGGAAGGAATTCGTCCTTTATGGGAGGACTCTGCTAACTGCAATGGTGGTAAATGGATTATACGATTCAAAAAGGTTGTCTCAGGCCGTTTTTGGGAGGACCTGGTTCTTGCCTTAGTGGGTGACCAATTGGATTATGGGGATAACATATGTGGTGCAGTACTAAGCATTCGTTTCAACGAGGATATATTGAGTGTCTGGAATCGCAATGCTTCAGACCATCAGGCCGTAATGGCTCTGAGAGATTCAATCAAACGCCACTTAAAGCTTCCTCACAGCTATGTTATGGAGTACAAGCCCCATGACGCCTCTCTGCGAGACAATTCATCTTACAGGAACACTTGGTTGAGAGGCTAG 708 0.4534 MDFTAEKKDAENNTANNPENVHQSLDSSQLASALDSSNTNKETEERQARELKAGLHPLKNKFVFWYTRRTPGVRNQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSSLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDYGDNICGAVLSIRFNEDILSVWNRNASDHQAVMALRDSIKRHLKLPHSYVMEYKPHDASLRDNSSYRNTWLRG 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00969 235 Pfam Eukaryotic initiation factor 4E 57 215 IPR001040 GO:0003723|GO:0003743|GO:0006413
Cca08g00969 235 PANTHER BNAA10G16710D PROTEIN 32 235 - -
Cca08g00969 235 MobiDBLite consensus disorder prediction 1 46 - -
Cca08g00969 235 SUPERFAMILY eIF4e-like 38 231 IPR023398 -
Cca08g00969 235 ProSitePatterns Eukaryotic initiation factor 4E signature. 113 136 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Cca08g00969 235 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 32 235 IPR001040 GO:0003723|GO:0003743|GO:0006413
Cca08g00969 235 MobiDBLite consensus disorder prediction 14 38 - -
Cca08g00969 235 Gene3D RNA Cap, Translation Initiation Factor Eif4e 28 228 IPR023398 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00969 Cca-Chr8 23136167 23141242 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g00969 26 235 Eukaryotic Initiation Factors Gene Family AT5G18110 80.952 9.43e-128 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00969 K03259 - gmx:100499744 439.884